UniProt Q0PF16
Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite motif-containing protein 5 (Q0PF16)
Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite motif-containing protein 5 (UniProt Q0PF16), EC 2.3.2.27, 6.1.1.11: 19 experimental structures on GenesisL1, 2 ligands bound, 9 pockets. Binding sites, pockets…
- UniProt
- Q0PF16
- Protein
- Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite…
- EC
- 2.3.2.27, 6.1.1.11, 6.3.2.-
- Experimental structures
- 19
- Predicted models
- 0
- Ligands
- 2
- Pockets
- 9 · 3 records with a druggable one
Structures
19 records of Q0PF16 in the MolNFT archive: 19 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2LM3 | Structure of the rhesus monkey TRIM5alpha PRYSPRY domain | solution nmr | A | — | — |
| 2LM3 | Structure of the rhesus monkey TRIM5ALPHA pryspry domain | solution nmr | A | — | — |
| 3UV9 | Structure of the rhesus monkey TRIM5alpha deltav1 PRYSPRY domain | x-ray diffraction | A | — | — |
| 3UV9 | Structure of the rhesus monkey TRIM5ALPHA DELTAV1 pryspry domain | x-ray diffraction | A | — | — |
| 4B3N | Crystal structure of rhesus TRIM5alpha PRY/SPRY domain | x-ray diffraction | A, B | — | — |
| 4B3N | Crystal structure of rhesus TRIM5ALPHA PRY/SPRY domain | x-ray diffraction | A, B | — | — |
| 4TKP | Complex of Ubc13 with the RING domain of the TRIM5alpha retroviral restriction factor | x-ray diffraction | B | — | — |
| 4TKP | Complex of UBC13 with the ring domain of the TRIM5ALPHA retroviral restriction factor | x-ray diffraction | B | — | — |
| 5EIU | Mini TRIM5 B-box 2 dimer C2 crystal form | x-ray diffraction | A, D | ZN | — |
| 5EIU | Mini TRIM5 B-box 2 dimer C2 crystal form | x-ray diffraction | A, D | — | — |
| 5F7T | TRIM5 B-box2 and coiled-coil chimera | x-ray diffraction | E, F, H, L | ZN | 3 (best 0.63) |
| 5F7T | TRIM5 B-BOX2 and coiled-coil chimera | x-ray diffraction | E, F, H, L | — | — |
| 5IEA | TRIM5 B-box2 and coiled-coil chimera | x-ray diffraction | A, B, C, D, F, K | ZN | — |
| 5IEA | TRIM5 B-BOX2 and coiled-coil chimera | x-ray diffraction | A, B, C, D, F, K | — | — |
| 5K3Q | Rhesus macaques Trim5alpha Bbox2 domain | x-ray diffraction | A, B, C, D | ZN, NO3 | 1 (best 0.53) |
| 5K3Q | Rhesus macaques TRIM5ALPHA BBOX2 domain | x-ray diffraction | A, B, C, D | — | — |
| 5W9A | The structure of the Trim5alpha Bbox- coiled coil in complex LC3B | x-ray diffraction | A, B | ZN | 5 (best 0.75) |
| 5W9A | The structure of the TRIM5ALPHA bbox- coiled coil in complex LC3B | x-ray diffraction | A, B | ZN | — |
| Q0PF16 | AlphaFold monomer V2.0 prediction for tripartite motif-containing protein 5 (Q0PF16) | — | — | — |
Ligands
Experiment against prediction
- 4B3N chain B against the predicted model P0AEX9: TM-score 0.66, RMSD 0.43 Å
- 4B3N chain A against the predicted model P0AEX9: TM-score 0.66, RMSD 0.44 Å
Elsewhere
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