UniProt Q06756
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Q06756)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (UniProt Q06756), EC 4.6.1.12: 4 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 36 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q06756
- Protein
- 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
- EC
- 4.6.1.12
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 36 · 4 records with a druggable one
Structures
5 records of Q06756 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5IWX | Crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Bacillus subtitis | x-ray diffraction | A, B, C, D, E, F | MG | 8 (best 0.85) |
| 5IWX | Crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from bacillus subtitis | x-ray diffraction | A, B, C, D, E, F | MG | 8 (best 0.85) |
| 5IWY | Crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Bacillus subtitis… | x-ray diffraction | A, B, C, D, E, F | MG, C5P | 10 (best 0.85) |
| 5IWY | Crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from bacillus subtitis… | x-ray diffraction | A, B, C, D, E, F | MG, C5P | 10 (best 0.85) |
| Q06756 | AlphaFold monomer V2.0 prediction for 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Q06756) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5IWX chain C against the predicted model Q06756: TM-score 0.99, RMSD 0.38 Å
- 5IWY chain A against the predicted model Q06756: TM-score 0.99, RMSD 0.42 Å
- 5IWY chain A against the predicted model Q06756: TM-score 0.99, RMSD 0.42 Å
- 5IWX chain B against the predicted model Q06756: TM-score 0.99, RMSD 0.43 Å
- 5IWX chain B against the predicted model Q06756: TM-score 0.99, RMSD 0.43 Å
- 5IWX chain A against the predicted model Q06756: TM-score 0.99, RMSD 0.45 Å
- 5IWX chain A against the predicted model Q06756: TM-score 0.99, RMSD 0.45 Å
- 5IWY chain D against the predicted model Q06756: TM-score 0.99, RMSD 0.48 Å
- 5IWY chain D against the predicted model Q06756: TM-score 0.99, RMSD 0.48 Å
- 5IWX chain D against the predicted model Q06756: TM-score 0.99, RMSD 0.49 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.