UniProt Q03630
Trafficking protein particle complex subunit BET5 (Q03630)
Trafficking protein particle complex subunit BET5 (UniProt Q03630): 19 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 27 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q03630
- Protein
- Trafficking protein particle complex subunit BET5
- Experimental structures
- 19
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 27 · 9 records with a druggable one
Structures
20 records of Q03630 in the MolNFT archive: 19 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3CUE | Crystal structure of a TRAPP subassembly activating the Rab Ypt1p | x-ray diffraction | C, I, O, U | — | — |
| 3CUE | Crystal structure of a trapp subassembly activating the rab YPT1P | x-ray diffraction | C, I, O, U | — | — |
| 7E2C | Monomer of TRAPPII (open) | electron microscopy | D | — | 4 (best 0.75) |
| 7E2C | Monomer of trappii (open) | electron microscopy | D | — | — |
| 7E2D | Monomer of TRAPPII (Closed) | electron microscopy | D | — | 3 (best 0.78) |
| 7E2D | Monomer of trappii (closed) | electron microscopy | D | — | — |
| 7E8S | Intact TRAPPII (state I). | electron microscopy | D, O | — | 2 (best 0.83) |
| 7E8S | Intact trappii (state I). | electron microscopy | D, O | — | — |
| 7E8T | Monomer of Ypt32-TRAPPII | electron microscopy | D | — | 2 (best 0.81) |
| 7E8T | Monomer of YPT32-trappii | electron microscopy | D | — | — |
| 7E93 | Intact TRAPPII (state III). | electron microscopy | D, O | — | 4 (best 0.83) |
| 7E93 | Intact trappii (state III). | electron microscopy | D, O | — | — |
| 7E94 | Intact TRAPPII (State II) | electron microscopy | D, O | — | 2 (best 0.83) |
| 7E94 | Intact trappii (state II) | electron microscopy | D, O | — | — |
| 7EA3 | Intact YPT32-trappii (dimer). | electron microscopy | D, Q | — | — |
| 7KMT | Structure of the yeast TRAPPIII-Ypt1(Rab1) complex | electron microscopy | G | — | 5 (best 0.83) |
| 7KMT | Structure of the yeast trappiii-YPT1(RAB1) complex | electron microscopy | G | — | — |
| 7U05 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/closed state (composite structure) | electron microscopy | G, g | — | 3 (best 0.84) |
| 7U06 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/open state (composite structure) | electron microscopy | G, g | PLM | 2 (best 0.84) |
| Q03630 | AlphaFold monomer V2.0 prediction for trafficking protein particle complex subunit BET5 (Q03630) | predicted | A | — | — |
Ligands
- PLM · Palmitic acid · in 1 record
Experiment against prediction
- 7U05 chain g against the predicted model Q03630: TM-score 0.94, RMSD 1.70 Å
- 7U06 chain g against the predicted model Q03630: TM-score 0.94, RMSD 1.68 Å
- 7U05 chain G against the predicted model Q03630: TM-score 0.93, RMSD 1.74 Å
- 3CUE chain U against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain U against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain O against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain O against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain I against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain I against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
- 3CUE chain C against the predicted model Q03630: TM-score 0.93, RMSD 1.33 Å
Elsewhere
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