UniProt P92277

Photosystem II reaction center protein M (P92277)

Photosystem II reaction center protein M (UniProt P92277): 6 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.

UniProt: P92277
Protein: Photosystem II reaction center protein M
Experimental structures: 6
Predicted models: 1
Ligands: 5
Pockets: 5 · 4 records with a druggable one

Structures

7 records of P92277 in the MolNFT archive: 6 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
6KAC	Cryo-EM structure of the C2S2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii	electron microscopy	M, m	CLA, BCR, SQD, LMG, LHG	1 (best 0.83)
6KAC	Cryo-EM structure of the C2S2-type psii-lhcii supercomplex from chlamydomonas reihardtii	electron microscopy	M, m	CLA, BCR, SQD, LMG, LHG	1 (best 0.83)
6KAD	Cryo-EM structure of the C2S2M2L2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii	electron microscopy	M, m	CLA, BCR, SQD, LMG, LHG	2 (best 0.81)
6KAF	C2S2M2N2-type PSII-LHCII	electron microscopy	m, M	LHG, SQD, CLA, BCR, LMG	1 (best 0.83)
8KDE	Cryo-EM structure of an intermediate-state complex during the process of photosystem II repair	electron microscopy	M	CLA, BCR, LMG, LHG	—
8ZEE	Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of photosystem II…	electron microscopy	M	CLA, BCR, LMG, LHG	—
P92277	AlphaFold monomer V2.0 prediction for photosystem II reaction center protein M (P92277)	predicted	A	—	—

Ligands

BCR · Beta-carotene · in 6 records
CLA · Chlorophyll A · in 6 records
LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 6 records
LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 6 records
SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 4 records

Experiment against prediction

6KAF chain m against the predicted model P92277: TM-score 0.90, RMSD 0.51 Å
6KAF chain M against the predicted model P92277: TM-score 0.86, RMSD 0.66 Å
6KAD chain M against the predicted model P92277: TM-score 0.86, RMSD 0.64 Å
6KAC chain M against the predicted model P92277: TM-score 0.81, RMSD 0.95 Å
6KAC chain M against the predicted model P92277: TM-score 0.81, RMSD 0.95 Å
6KAC chain m against the predicted model P92277: TM-score 0.81, RMSD 0.95 Å
8KDE chain M against the predicted model P92277: TM-score 0.79, RMSD 1.05 Å
8ZEE chain M against the predicted model P92277: TM-score 0.77, RMSD 1.01 Å

Elsewhere

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