UniProt P62667
30S ribosomal protein S7 (P62667)
30S ribosomal protein S7 (UniProt P62667): 30 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 22 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62667
- Protein
- 30S ribosomal protein S7
- Experimental structures
- 30
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 22 · 16 records with a druggable one
Structures
31 records of P62667 in the MolNFT archive: 30 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | G | — | 1 (best 0.83) |
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | G | — | 1 (best 0.83) |
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | h | — | — |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | h | — | — |
| 4V5L | The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog | x-ray diffraction | AG | — | 2 (best 0.85) |
| 4V63 | Structural basis for translation termination on the 70S ribosome. | x-ray diffraction | AG, CG | MG | — |
| 4V67 | Crystal structure of a translation termination complex formed with release factor RF2. | x-ray diffraction | AG, CG | MG | — |
| 4V7P | Recognition of the amber stop codon by release factor RF1. | x-ray diffraction | AG, DG | — | 1 (best 0.86) |
| 4V83 | Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S… | x-ray diffraction | AG, CG | MG | 1 (best 0.88) |
| 4V84 | Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. | x-ray diffraction | AG, CG | — | 1 (best 0.86) |
| 4V9J | 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AG, CG | — | — |
| 4V9K | 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AG, CG | — | — |
| 4V9L | 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AG, CG | — | 1 (best 0.86) |
| 4V9M | 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AG, CG | — | 1 (best 0.86) |
| 4V9N | Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. | x-ray diffraction | AG, CG | MG | 1 (best 0.86) |
| 4V9Q | Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. | x-ray diffraction | BG, DG | MG | — |
| 4W29 | 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA… | x-ray diffraction | AG, CG | — | — |
| 4XEJ | IRES bound to bacterial Ribosome | x-ray diffraction | AS07, BS07 | — | 1 (best 0.87) |
| 4ZER | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | x-ray diffraction | 1g, 2g | MG | — |
| 5E81 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble… | x-ray diffraction | 6E, 62 | — | — |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | PA, UC | MG | — |
| 5V8I | Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 | x-ray diffraction | 1g, 2g | MG | — |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | PA, TC | MG | 1 (best 0.86) |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | QA, VC | MG | 2 (best 0.89) |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | OA, RC | MG | 2 (best 0.86) |
| 6C5L | Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination… | x-ray diffraction | AG, CG | — | 1 (best 0.87) |
| 6CFJ | Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound… | x-ray diffraction | 1g, 2g | — | 1 (best 0.86) |
| 6CFK | Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound… | x-ray diffraction | 1g, 2g | MG | — |
| 6CFL | Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to… | x-ray diffraction | 1g, 2g | MG | 2 (best 0.86) |
| 6N1D | X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… | x-ray diffraction | AS07, BS07 | — | — |
| P62667 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S7 (P62667) | predicted | A | — | 2 (best 0.35) |
Ligands
- MG · Magnesium ion · in 13 records
Experiment against prediction
- 6CFL chain 1g against the predicted model P62667: TM-score 0.98, RMSD 0.68 Å
- 5V8I chain 1g against the predicted model P62667: TM-score 0.98, RMSD 0.70 Å
- 4ZER chain 1g against the predicted model P62667: TM-score 0.98, RMSD 0.72 Å
- 6CFK chain 1g against the predicted model P62667: TM-score 0.98, RMSD 0.73 Å
- 5E81 chain 62 against the predicted model P62667: TM-score 0.97, RMSD 0.83 Å
- 4KVB chain G against the predicted model P62667: TM-score 0.97, RMSD 0.88 Å
- 4KVB chain G against the predicted model P62667: TM-score 0.97, RMSD 0.88 Å
- 6CFJ chain 1g against the predicted model P62667: TM-score 0.97, RMSD 0.91 Å
- 4V5L chain AG against the predicted model P62667: TM-score 0.97, RMSD 0.92 Å
- 5J4D chain PA against the predicted model P62667: TM-score 0.96, RMSD 0.95 Å
Elsewhere
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