UniProt P62664
30S ribosomal protein S4 (P62664)
30S ribosomal protein S4 (UniProt P62664): 22 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 3 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62664
- Protein
- 30S ribosomal protein S4
- Experimental structures
- 22
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 3 · 2 records with a druggable one
Structures
23 records of P62664 in the MolNFT archive: 22 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | D | — | — |
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | D | — | — |
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | e | — | — |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | e | — | — |
| 4V63 | Structural basis for translation termination on the 70S ribosome. | x-ray diffraction | AD, CD | — | — |
| 4V67 | Crystal structure of a translation termination complex formed with release factor RF2. | x-ray diffraction | AD, CD | — | — |
| 4V7P | Recognition of the amber stop codon by release factor RF1. | x-ray diffraction | AD, DD | — | — |
| 4V83 | Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S… | x-ray diffraction | AD, CD | — | — |
| 4V84 | Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. | x-ray diffraction | AD, CD | — | — |
| 4V9J | 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AD, CD | — | — |
| 4V9K | 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AD, CD | — | — |
| 4V9L | 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AD, CD | — | — |
| 4V9M | 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AD, CD | — | — |
| 4V9N | Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. | x-ray diffraction | AD, CD | — | — |
| 4V9Q | Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. | x-ray diffraction | BD, DD | — | — |
| 4W29 | 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA… | x-ray diffraction | AD, CD | — | — |
| 4XEJ | IRES bound to bacterial Ribosome | x-ray diffraction | AS04, BS04 | ZN | — |
| 4ZER | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | x-ray diffraction | 1d, 2d | MG, SF4 | 1 (best 0.86) |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | MA, RC | MG | — |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | MA, QC | MG | — |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | NA, SC | MG | — |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | LA, OC | MG | — |
| P62664 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S4 (P62664) | predicted | A | — | 2 (best 0.55) |
Ligands
Experiment against prediction
- 4ZER chain 2d against the predicted model P62664: TM-score 0.98, RMSD 0.88 Å
- 4ZER chain 1d against the predicted model P62664: TM-score 0.98, RMSD 0.91 Å
- 6BOK chain LA against the predicted model P62664: TM-score 0.98, RMSD 0.92 Å
- 5J4D chain MA against the predicted model P62664: TM-score 0.97, RMSD 0.95 Å
- 5J4D chain RC against the predicted model P62664: TM-score 0.97, RMSD 0.95 Å
- 4KVB chain D against the predicted model P62664: TM-score 0.97, RMSD 0.98 Å
- 4KVB chain D against the predicted model P62664: TM-score 0.97, RMSD 0.98 Å
- 4V67 chain AD against the predicted model P62664: TM-score 0.97, RMSD 1.00 Å
- 4V83 chain AD against the predicted model P62664: TM-score 0.97, RMSD 1.03 Å
- 4XEJ chain BS04 against the predicted model P62664: TM-score 0.97, RMSD 1.04 Å
Elsewhere
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