UniProt P62656
30S ribosomal protein S14 type Z (P62656)
30S ribosomal protein S14 type Z (UniProt P62656): 28 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 22 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62656
- Protein
- 30S ribosomal protein S14 type Z
- Experimental structures
- 28
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 22 · 16 records with a druggable one
Structures
29 records of P62656 in the MolNFT archive: 28 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | N | MG, ZN | 2 (best 0.81) |
| 4KVB | Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 | x-ray diffraction | N | MG, ZN | 2 (best 0.81) |
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | o | — | 1 (best 0.86) |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | o | — | 2 (best 0.88) |
| 4V63 | Structural basis for translation termination on the 70S ribosome. | x-ray diffraction | AN, CN | MG, ZN | 1 (best 0.86) |
| 4V67 | Crystal structure of a translation termination complex formed with release factor RF2. | x-ray diffraction | AN, CN | MG, ZN | 1 (best 0.86) |
| 4V7P | Recognition of the amber stop codon by release factor RF1. | x-ray diffraction | AN, DN | ZN | 1 (best 0.88) |
| 4V83 | Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S… | x-ray diffraction | AN, CN | ZN, MG | 2 (best 0.86) |
| 4V84 | Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. | x-ray diffraction | AN, CN | ZN | — |
| 4V9J | 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AN, CN | — | 1 (best 0.85) |
| 4V9K | 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | AN, CN | — | — |
| 4V9L | 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AN, CN | — | — |
| 4V9M | 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | AN, CN | — | — |
| 4V9N | Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. | x-ray diffraction | AN, CN | MG, ZN | — |
| 4V9Q | Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. | x-ray diffraction | BN, DN | MG, ZN | — |
| 4W29 | 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA… | x-ray diffraction | AN, CN | — | — |
| 4WQ1 | Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the… | x-ray diffraction | 5I, 5A | MG, ZN | 1 (best 0.88) |
| 4XEJ | IRES bound to bacterial Ribosome | x-ray diffraction | AS14, BS14 | ZN | — |
| 4ZER | Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | x-ray diffraction | 1n, 2n | MG, ZN | — |
| 5A9Z | Complex of Thermous thermophilus ribosome bound to BipA-GDPCP | electron microscopy | BR | — | 1 (best 0.90) |
| 5D8B | Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch | x-ray diffraction | OA, KC | ZN, MG | — |
| 5E81 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble… | x-ray diffraction | 5I, 5A | MG, ZN | 2 (best 0.89) |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | WA, BD | MG | 1 (best 0.88) |
| 5V8I | Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 | x-ray diffraction | 1n, 2n | MG, ZN | — |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | WA, AD | MG | — |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | XA, CD | MG | 1 (best 0.87) |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | VA, YC | MG | 2 (best 0.88) |
| 6N1D | X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… | x-ray diffraction | AS14, BS14 | — | 1 (best 0.86) |
| P62656 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S14 type Z (P62656) | predicted | A | — | — |
Ligands
Experiment against prediction
- 4ZER chain 1n against the predicted model P62656: TM-score 0.94, RMSD 1.14 Å
- 5J4D chain WA against the predicted model P62656: TM-score 0.94, RMSD 1.12 Å
- 5V8I chain 1n against the predicted model P62656: TM-score 0.93, RMSD 1.15 Å
- 4WQ1 chain 5I against the predicted model P62656: TM-score 0.92, RMSD 0.97 Å
- 5E81 chain 5I against the predicted model P62656: TM-score 0.91, RMSD 1.26 Å
- 4V67 chain AN against the predicted model P62656: TM-score 0.91, RMSD 1.31 Å
- 6BOK chain VA against the predicted model P62656: TM-score 0.91, RMSD 1.06 Å
- 4V9N chain AN against the predicted model P62656: TM-score 0.90, RMSD 1.33 Å
- 5D8B chain OA against the predicted model P62656: TM-score 0.90, RMSD 1.25 Å
- 4WQ1 chain 5A against the predicted model P62656: TM-score 0.90, RMSD 0.93 Å
Elsewhere
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