UniProt P62652
50S ribosomal protein L32 (P62652)
50S ribosomal protein L32 (UniProt P62652): 19 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 14 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62652
- Protein
- 50S ribosomal protein L32
- Experimental structures
- 19
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 14 · 4 records with a druggable one
Structures
20 records of P62652 in the MolNFT archive: 19 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4V4I | Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. | x-ray diffraction | Y | — | — |
| 4V4J | Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. | x-ray diffraction | Y | — | — |
| 4V63 | Structural basis for translation termination on the 70S ribosome. | x-ray diffraction | B5, D5 | — | — |
| 4V67 | Crystal structure of a translation termination complex formed with release factor RF2. | x-ray diffraction | B5, D5 | — | — |
| 4V7P | Recognition of the amber stop codon by release factor RF1. | x-ray diffraction | B2, C2 | — | — |
| 4V83 | Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S… | x-ray diffraction | B2, D2 | — | — |
| 4V84 | Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. | x-ray diffraction | B2, D2 | — | — |
| 4V9J | 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | B5, D5 | — | — |
| 4V9K | 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and… | x-ray diffraction | B5, D5 | — | — |
| 4V9L | 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | B5, D5 | — | — |
| 4V9M | 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP… | x-ray diffraction | B5, D5 | — | — |
| 4V9N | Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. | x-ray diffraction | B5, D5 | — | — |
| 4V9Q | Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. | x-ray diffraction | A2, C2 | — | — |
| 4XEJ | IRES bound to bacterial Ribosome | x-ray diffraction | AL32, BL32 | — | 4 (best 0.88) |
| 5J4D | E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon | x-ray diffraction | CA, HC | MG, ZN | 3 (best 0.88) |
| 5V8I | Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 | x-ray diffraction | 15, 25 | MG, ZN | 4 (best 0.88) |
| 6B4V | Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome | x-ray diffraction | CA, GC | ZN, MG | 3 (best 0.88) |
| 6BOH | Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the… | x-ray diffraction | CA, HC | MG, ZN | — |
| 6BOK | E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome | x-ray diffraction | CA, FC | MG, ZN | — |
| P62652 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L32 (P62652) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5V8I chain 15 against the predicted model P62652: TM-score 0.96, RMSD 0.56 Å
- 5V8I chain 25 against the predicted model P62652: TM-score 0.95, RMSD 0.58 Å
- 5J4D chain CA against the predicted model P62652: TM-score 0.95, RMSD 0.62 Å
- 6BOK chain CA against the predicted model P62652: TM-score 0.94, RMSD 0.66 Å
- 6BOH chain CA against the predicted model P62652: TM-score 0.94, RMSD 0.67 Å
- 6B4V chain CA against the predicted model P62652: TM-score 0.93, RMSD 0.71 Å
- 4V84 chain B2 against the predicted model P62652: TM-score 0.86, RMSD 1.55 Å
- 4V9Q chain A2 against the predicted model P62652: TM-score 0.86, RMSD 1.23 Å
- 4V9N chain B5 against the predicted model P62652: TM-score 0.85, RMSD 1.33 Å
- 4XEJ chain AL32 against the predicted model P62652: TM-score 0.85, RMSD 1.56 Å
Elsewhere
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