UniProt P60798
Pyridoxal 5'-phosphate synthase subunit PdxS (P60798)
Pyridoxal 5'-phosphate synthase subunit PdxS (UniProt P60798): 1 experimental structure and 1 predicted model on GenesisL1, 3 ligands bound, 21 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P60798
- Protein
- Pyridoxal 5'-phosphate synthase subunit PdxS
- Experimental structures
- 1
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 21 · 2 records with a druggable one
Structures
2 records of P60798 in the MolNFT archive: 1 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 8QOC | Crystal structure of Staphylococcus aureus PLP Synthase (Pdx1) | x-ray diffraction | A, B, C, D, E, F, G, H | PO4, CL, MG | 20 (best 0.72) |
| P60798 | AlphaFold monomer V2.0 prediction for pyridoxal 5'-phosphate synthase subunit pdxs (P60798) | predicted | A | — | 1 (best 0.71) |
Ligands
Experiment against prediction
- 8QOC chain H against the predicted model P60798: TM-score 0.99, RMSD 0.46 Å
- 8QOC chain B against the predicted model P60798: TM-score 0.99, RMSD 0.47 Å
- 8QOC chain E against the predicted model P60798: TM-score 0.99, RMSD 0.49 Å
- 8QOC chain F against the predicted model P60798: TM-score 0.99, RMSD 0.53 Å
- 8QOC chain A against the predicted model P60798: TM-score 0.99, RMSD 0.70 Å
- 8QOC chain G against the predicted model P60798: TM-score 0.99, RMSD 0.96 Å
- 8QOC chain D against the predicted model P60798: TM-score 0.99, RMSD 0.99 Å
- 8QOC chain C against the predicted model P60798: TM-score 0.99, RMSD 0.69 Å
Elsewhere
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