UniProt P53420

Collagen alpha-4(IV) chain (P53420)

Collagen alpha-4(IV) chain (UniProt P53420): 3 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 20 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.

UniProt: P53420
Protein: Collagen alpha-4(IV) chain
Experimental structures: 3
Predicted models: 1
Ligands: 1
Pockets: 20 · 1 record with a druggable one

Structures

4 records of P53420 in the MolNFT archive: 3 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
5NB1	Crystal structures of homooligomers of collagen type IV. alpha4NC1	x-ray diffraction	A, B, C, D, E, F	—	20 (best 0.80)
5NB1	Crystal structures of homooligomers of collagen type IV. ALPHA4NC1	x-ray diffraction	A, B, C, D, E, F	—	—
6WKU	Twelve chloride ions drive assembly of human ALPHA345 collagen IV NC1 domain	x-ray diffraction	A	CL	—
P53420	AlphaFold monomer V2.0 prediction for collagen alpha-4(IV) chain (P53420)	predicted	A	—	—

Ligands

CL · Chloride ion · in 1 record

Experiment against prediction

5NB1 chain D against the predicted model P53420: TM-score 0.85, RMSD 2.63 Å
5NB1 chain D against the predicted model P53420: TM-score 0.85, RMSD 2.63 Å
5NB1 chain C against the predicted model P53420: TM-score 0.85, RMSD 2.62 Å
5NB1 chain C against the predicted model P53420: TM-score 0.85, RMSD 2.62 Å
5NB1 chain A against the predicted model P53420: TM-score 0.85, RMSD 2.65 Å
5NB1 chain A against the predicted model P53420: TM-score 0.85, RMSD 2.65 Å
5NB1 chain B against the predicted model P53420: TM-score 0.85, RMSD 2.64 Å
5NB1 chain B against the predicted model P53420: TM-score 0.85, RMSD 2.64 Å
5NB1 chain F against the predicted model P53420: TM-score 0.84, RMSD 2.55 Å
5NB1 chain F against the predicted model P53420: TM-score 0.84, RMSD 2.55 Å

Elsewhere

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