UniProt P49903
Selenide, water dikinase 1 (P49903)
Selenide, water dikinase 1 (UniProt P49903), EC 2.7.9.3: 4 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 30 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P49903
- Protein
- Selenide, water dikinase 1
- EC
- 2.7.9.3
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 30 · 5 records with a druggable one
Structures
5 records of P49903 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3FD5 | Crystal structure of human selenophosphate synthetase 1 complex with AMPCP | x-ray diffraction | A, B | AP2, PO4, MG, K | 6 (best 0.83) |
| 3FD5 | Crystal structure of human selenophosphate synthetase 1 complex with ampcp | x-ray diffraction | A, B | AP2, PO4, MG, K | 6 (best 0.83) |
| 3FD6 | Crystal structure of human selenophosphate synthetase 1 complex with ADP and phosphate | x-ray diffraction | A, B | ADP, PO4, MG, NA | 7 (best 0.82) |
| 3FD6 | Crystal structure of human selenophosphate synthetase 1 complex with ADP and phosphate | x-ray diffraction | A, B | ADP, PO4, MG, NA | 7 (best 0.82) |
| P49903 | AlphaFold monomer V2.0 prediction for selenide, water dikinase 1 (P49903) | predicted | A | — | 4 (best 0.65) |
Ligands
Experiment against prediction
- 3FD5 chain A against the predicted model P49903: TM-score 0.99, RMSD 0.86 Å
- 3FD5 chain A against the predicted model P49903: TM-score 0.99, RMSD 0.86 Å
- 3FD5 chain B against the predicted model P49903: TM-score 0.98, RMSD 0.90 Å
- 3FD5 chain B against the predicted model P49903: TM-score 0.98, RMSD 0.90 Å
- 3FD6 chain A against the predicted model P49903: TM-score 0.98, RMSD 0.91 Å
- 3FD6 chain A against the predicted model P49903: TM-score 0.98, RMSD 0.91 Å
- 3FD6 chain B against the predicted model P49903: TM-score 0.98, RMSD 0.94 Å
- 3FD6 chain B against the predicted model P49903: TM-score 0.98, RMSD 0.94 Å
Elsewhere
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