UniProt P45779
Type II secretion system protein D (P45779)
Type II secretion system protein D (UniProt P45779): 4 experimental structures and 1 predicted model on GenesisL1, 40 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P45779
- Protein
- Type II secretion system protein D
- Experimental structures
- 4
- Predicted models
- 1
- Pockets
- 40 · 2 records with a druggable one
Structures
5 records of P45779 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5WQ8 | CryoEM structure of type II secretion system secretin GspD in Vibrio cholerae | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O | — | 20 (best 0.69) |
| 5WQ8 | Cryoem structure of type II secretion system secretin gspd in vibrio cholerae | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O | — | — |
| 5WQ9 | CryoEM structure of type II secretion system secretin GspD G453A mutant in Vibrio cholerae | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O | — | 20 (best 0.72) |
| 5WQ9 | Cryoem structure of type II secretion system secretin gspd G453A mutant in vibrio cholerae | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O | — | — |
| P45779 | AlphaFold monomer V2.0 prediction for secretin gspd (P45779) | predicted | A | — | — |
Experiment against prediction
- 5WQ8 chain C against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain J against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain F against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain L against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain A against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain D against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain M against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain A against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain E against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
- 5WQ8 chain G against the predicted model P45779: TM-score 0.94, RMSD 1.98 Å
Elsewhere
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