UniProt P33309
Protein DOM34 (P33309)
Protein DOM34 (UniProt P33309), EC 3.1.-.-: 9 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P33309
- Protein
- Protein DOM34
- EC
- 3.1.-.-
- Experimental structures
- 9
- Predicted models
- 1
Structures
10 records of P33309 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2VGM | Structure of S. cerevisiae Dom34, a translation termination-like factor involved in RNA quality… | x-ray diffraction | A | — | — |
| 2VGM | Structure of S. cerevisiae DOM34, a translation termination-like factor involved in RNA quality… | x-ray diffraction | A | — | — |
| 2VGN | Structure of S. cerevisiae Dom34, a translation termination-like factor involved in RNA quality… | x-ray diffraction | A, B | — | — |
| 2VGN | Structure of S. cerevisiae DOM34, a translation termination-like factor involved in RNA quality… | x-ray diffraction | A, B | — | — |
| 3IZQ | Structure of the Dom34-Hbs1-GDPNP complex bound to a translating ribosome | electron microscopy | 0 | — | — |
| 3IZQ | Structure of the DOM34-HBS1-gdpnp complex bound to a translating ribosome | electron microscopy | 0 | — | — |
| 3J16 | Models of ribosome-bound Dom34p and Rli1p and their ribosomal binding partners | electron microscopy | A | — | — |
| 3J16 | Models of ribosome-bound DOM34P and RLI1P and their ribosomal binding partners | electron microscopy | A | — | — |
| 5M1J | Nonstop ribosomal complex bound with Dom34 and Hbs1 | electron microscopy | A1 | — | — |
| P33309 | AlphaFold monomer V2.0 prediction for protein DOM34 (P33309) | predicted | A | — | — |
Experiment against prediction
- 5M1J chain A1 against the predicted model P33309: TM-score 0.80, RMSD 3.72 Å
- 3IZQ chain 0 against the predicted model P33309: TM-score 0.73, RMSD 4.48 Å
- 3IZQ chain 0 against the predicted model P33309: TM-score 0.73, RMSD 4.48 Å
- 2VGN chain B against the predicted model P33309: TM-score 0.71, RMSD 3.10 Å
- 2VGN chain B against the predicted model P33309: TM-score 0.71, RMSD 3.10 Å
- 2VGM chain A against the predicted model P33309: TM-score 0.71, RMSD 3.01 Å
- 2VGM chain A against the predicted model P33309: TM-score 0.71, RMSD 3.01 Å
- 2VGN chain A against the predicted model P33309: TM-score 0.71, RMSD 3.22 Å
- 2VGN chain A against the predicted model P33309: TM-score 0.71, RMSD 3.22 Å
- 3J16 chain A against the predicted model P33309: TM-score 0.55, RMSD 5.24 Å
Elsewhere
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