UniProt P29018
ATP-binding/permease protein CydD (P29018)
ATP-binding/permease protein CydD (UniProt P29018): 4 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 30 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P29018
- Protein
- ATP-binding/permease protein CydD
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 30 · 3 records with a druggable one
Structures
5 records of P29018 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7ZDL | IF(heme/coordinated) conformation of CydDC in AMP-PNP(CydC)/AMP-PNP(CydD) bound state (Dataset-8) | electron microscopy | D | HEB, ANP, MG | — |
| 7ZDS | IF(apo/as isolated) conformation of CydDC mutant (E500Q.C) (Dataset-18) | electron microscopy | D | — | 9 (best 0.81) |
| 7ZDU | Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC)/ATP(CydD) bound state… | electron microscopy | D | ATP, MG | 9 (best 0.84) |
| 7ZEC | IF(heme/confined) conformation of CydDC in ATP(CydD) bound state (Dataset-15) | electron microscopy | D | HEB, MG, ATP | 12 (best 0.87) |
| P29018 | AlphaFold monomer V2.0 prediction for ATP-BINDING/PERMEASE protein cydd (P29018) | predicted | A | — | — |
Ligands
Experiment against prediction
- 7ZEC chain D against the predicted model P29018: TM-score 0.95, RMSD 2.14 Å
- 7ZDS chain D against the predicted model P29018: TM-score 0.94, RMSD 2.29 Å
- 7ZDL chain D against the predicted model P29018: TM-score 0.91, RMSD 2.81 Å
- 7ZDU chain D against the predicted model P29018: TM-score 0.87, RMSD 3.70 Å
Elsewhere
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