UniProt P28799
Paragranulin peptide (P28799)
Paragranulin peptide (UniProt P28799): 14 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P28799
- Protein
- Paragranulin peptide
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 5 · 2 records with a druggable one
Structures
15 records of P28799 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1G26 | The solution structure of a well-folded peptide based on the 31-residue amino-terminal subdomain of… | solution nmr | A | — | — |
| 1G26 | The solution structure of a well-folded peptide based on the 31- residue amino-terminal subdomain… | solution nmr | A | — | — |
| 2JYE | Human Granulin A | solution nmr | A | — | — |
| 2JYE | Human granulin a | solution nmr | A | — | — |
| 2JYT | Human Granulin C, isomer 1 | solution nmr | A | — | — |
| 2JYT | Human granulin C, isomer 1 | solution nmr | A | — | — |
| 2JYU | Human Granulin C, isomer 2 | solution nmr | A | — | — |
| 2JYU | Human granulin C, isomer 2 | solution nmr | A | — | — |
| 2JYV | Human Granulin F | solution nmr | A | — | — |
| 2JYV | Human granulin F | solution nmr | A | — | — |
| 6NUG | hGRNA4-28_3s | solution nmr | A | — | — |
| 6NUG | HGRNA4-28_3S | solution nmr | A | — | — |
| 8T8R | Sortilin-PGRN peptide complex | x-ray diffraction | B | — | 2 (best 0.63) |
| 8T8S | Sortilin-PGRN peptide complex | x-ray diffraction | C, D | CL | 3 (best 0.72) |
| P28799 | AlphaFold monomer V2.0 prediction for progranulin (P28799) | predicted | A | — | — |
Ligands
- CL · Chloride ion · in 1 record
Experiment against prediction
- 1G26 chain A against the predicted model P28799: TM-score 0.55, RMSD 2.17 Å
- 1G26 chain A against the predicted model P28799: TM-score 0.55, RMSD 2.17 Å
- 8T8R chain B against the predicted model P28799: TM-score 0.46, RMSD 0.97 Å
- 2JYE chain A against the predicted model P28799: TM-score 0.43, RMSD 4.08 Å
- 2JYE chain A against the predicted model P28799: TM-score 0.43, RMSD 4.08 Å
- 2JYV chain A against the predicted model P28799: TM-score 0.43, RMSD 2.21 Å
- 2JYV chain A against the predicted model P28799: TM-score 0.43, RMSD 2.21 Å
- 2JYT chain A against the predicted model P28799: TM-score 0.40, RMSD 3.14 Å
- 2JYT chain A against the predicted model P28799: TM-score 0.40, RMSD 3.14 Å
- 2JYU chain A against the predicted model P28799: TM-score 0.40, RMSD 3.93 Å
Elsewhere
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