UniProt P16857
Nitrogenase vanadium-iron protein delta chain (P16857)
Nitrogenase vanadium-iron protein delta chain (UniProt P16857), EC 1.18.6.1: 8 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 16 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P16857
- Protein
- Nitrogenase vanadium-iron protein delta chain
- EC
- 1.18.6.1
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 16 · 3 records with a druggable one
Structures
9 records of P16857 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5N6Y | Azotobacter vinelandii vanadium nitrogenase | x-ray diffraction | C, F | MG | — |
| 5N6Y | Azotobacter vinelandii vanadium nitrogenase | x-ray diffraction | C, F | MG | — |
| 7ADR | CO bound as bridging ligand at the active site of vanadium nitrogenase VFe protein | x-ray diffraction | C, F | MG | 5 (best 0.54) |
| 7ADR | Co bound as bridging ligand at the active site of vanadium nitrogenase vfe protein | x-ray diffraction | C, F | MG | — |
| 7ADY | CO-removed state of the active site of vanadium nitrogenase VFe protein | x-ray diffraction | C, F | MG | 5 (best 0.53) |
| 7ADY | Co-removed state of the active site of vanadium nitrogenase vfe protein | x-ray diffraction | C, F | MG | — |
| 7AIZ | Vanadium nitrogenase VFe protein, high CO state | x-ray diffraction | C, F | MG | 5 (best 0.54) |
| 7AIZ | Vanadium nitrogenase vfe protein, high co state | x-ray diffraction | C, F | MG | — |
| P16857 | AlphaFold monomer V2.0 prediction for nitrogenase vanadium-iron protein delta chain (P16857) | predicted | A | — | 1 (best 0.34) |
Ligands
- MG · Magnesium ion · in 8 records
Experiment against prediction
- 5N6Y chain C against the predicted model P16857: TM-score 0.98, RMSD 0.66 Å
- 5N6Y chain C against the predicted model P16857: TM-score 0.98, RMSD 0.66 Å
- 7ADR chain C against the predicted model P16857: TM-score 0.98, RMSD 0.67 Å
- 7ADR chain C against the predicted model P16857: TM-score 0.98, RMSD 0.67 Å
- 7ADY chain C against the predicted model P16857: TM-score 0.98, RMSD 0.67 Å
- 7ADY chain C against the predicted model P16857: TM-score 0.98, RMSD 0.67 Å
- 7AIZ chain C against the predicted model P16857: TM-score 0.98, RMSD 0.68 Å
- 7AIZ chain C against the predicted model P16857: TM-score 0.98, RMSD 0.68 Å
- 5N6Y chain F against the predicted model P16857: TM-score 0.98, RMSD 0.73 Å
- 5N6Y chain F against the predicted model P16857: TM-score 0.98, RMSD 0.73 Å
Elsewhere
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