UniProt P13921
Replication protein RepB (P13921)
Replication protein RepB (UniProt P13921): 9 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 25 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P13921
- Protein
- Replication protein RepB
- Experimental structures
- 9
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 25 · 2 records with a druggable one
Structures
10 records of P13921 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3DKX | Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), trigonal… | x-ray diffraction | A, B, C | — | — |
| 3DKX | Crystal structure of the replication initiator protein encoded on plasmid PMV158 (repb), trigonal… | x-ray diffraction | A, B, C | — | — |
| 3DKY | Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), tetragonal… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3DKY | Crystal structure of the replication initiator protein encoded on plasmid PMV158 (repb), tetragonal… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 4U87 | Crystal structure of the Ba-soaked C2 crystal form of pMV158 replication initiator RepB (P3221… | x-ray diffraction | A, B, C | — | — |
| 4U87 | Crystal structure of the ba-soaked C2 crystal form of PMV158 replication initiator repb (P3221… | x-ray diffraction | A, B, C | — | — |
| 8AMT | OBD-RepB pMV158 domain | x-ray diffraction | AAA | MN, CL | — |
| 8AMU | RepB pMV158 OBD domain bound to DDR region | x-ray diffraction | A, B, E, F | MN | 12 (best 0.51) |
| 8AMV | RepB pMV158 hexamer | x-ray diffraction | A, B, C, D, E, F | PO4, NA | 12 (best 0.83) |
| P13921 | AlphaFold monomer V2.0 prediction for replication protein repb (P13921) | predicted | A | — | 1 (best 0.26) |
Ligands
Experiment against prediction
- 8AMU chain A against the predicted model P13921: TM-score 0.98, RMSD 0.69 Å
- 8AMT chain AAA against the predicted model P13921: TM-score 0.98, RMSD 0.67 Å
- 8AMU chain E against the predicted model P13921: TM-score 0.98, RMSD 0.70 Å
- 8AMU chain B against the predicted model P13921: TM-score 0.97, RMSD 0.77 Å
- 3DKY chain B against the predicted model P13921: TM-score 0.97, RMSD 0.94 Å
- 3DKY chain B against the predicted model P13921: TM-score 0.97, RMSD 0.94 Å
- 8AMU chain F against the predicted model P13921: TM-score 0.97, RMSD 0.84 Å
- 3DKY chain D against the predicted model P13921: TM-score 0.92, RMSD 1.60 Å
- 3DKY chain D against the predicted model P13921: TM-score 0.92, RMSD 1.60 Å
- 3DKX chain C against the predicted model P13921: TM-score 0.87, RMSD 2.18 Å
Elsewhere
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