UniProt P11021
78 kDa glucose-regulated protein (P11021)
78 kDa glucose-regulated protein (UniProt P11021), EC 3.6.4.10: 46 experimental structures and 1 predicted model on GenesisL1, 19 ligands bound, 44 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- P11021
- Protein
- 78 kDa glucose-regulated protein
- EC
- 3.6.4.10
- Experimental structures
- 46
- Predicted models
- 1
- Ligands
- 19
- Pockets
- 44 · 4 records with a druggable one
Structures
47 records of P11021 in the MolNFT archive: 46 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3LDL | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 3LDL | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 3LDN | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in apo form | x-ray diffraction | A, B | — | — |
| 3LDN | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in apo form | x-ray diffraction | A, B | — | — |
| 3LDO | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 3LDO | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 3LDP | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 3LDP | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5E84 | ATP-bound state of BiP | x-ray diffraction | A, B, C, D, E, F | ATP, ZN, MG, SO4 | 20 (best 0.78) |
| 5E84 | ATP-bound state of bip | x-ray diffraction | A, B, C, D, E, F | — | — |
| 5E85 | Isolated sbd of bip | x-ray diffraction | A | — | — |
| 5E86 | isolated SBD of BiP with loop34 modification | x-ray diffraction | A | — | — |
| 5E86 | Isolated sbd of bip with LOOP34 modification | x-ray diffraction | A | — | — |
| 5EVZ | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | MG, PO4, ADP | 8 (best 0.77) |
| 5EVZ | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5EX5 | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | PO4, 7DD | — |
| 5EX5 | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5EXW | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | 7DT | 7 (best 0.78) |
| 5EXW | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5EY4 | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | DTP | — |
| 5EY4 | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5F0X | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | MG, PO4, DTP, DAT | — |
| 5F0X | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5F1X | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5F2R | Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with… | x-ray diffraction | A, B | ACP, MG | — |
| 5F2R | Crystal structure of human GRP78 (70KDA heat shock protein 5 / bip) ATPase domain in complex with… | x-ray diffraction | A, B | — | — |
| 5YP8 | P62/SQSTM1 zz domain with arg-peptide | x-ray diffraction | A, B | ZN | — |
| 5YPA | P62/SQSTM1 zz domain with lys-peptide | x-ray diffraction | A, B | ZN | — |
| 5YPB | P62/SQSTM1 zz domain with his-peptide | x-ray diffraction | A, B, C, D | ZN | — |
| 5YPC | P62/SQSTM1 zz domain with phe-peptide | x-ray diffraction | A, B, C, D | ZN | — |
| 5YPE | P62/SQSTM1 zz domain with tyr-peptide | x-ray diffraction | A, B, C, D | ZN | — |
| 5YPF | p62/SQSTM1 ZZ domain with Trp-peptide | x-ray diffraction | A, B, C, D | ZN | — |
| 5YPF | P62/SQSTM1 zz domain with TRP-peptide | x-ray diffraction | A, B, C, D | ZN | — |
| 5YPG | p62/SQSTM1 ZZ domain with Leu-peptide | x-ray diffraction | A, B | ZN | — |
| 5YPG | P62/SQSTM1 zz domain with leu-peptide | x-ray diffraction | A, B | ZN | — |
| 5YPH | p62/SQSTM1 ZZ domain with Ile-peptide | x-ray diffraction | A, B | ZN | — |
| 5YPH | P62/SQSTM1 zz domain with ile-peptide | x-ray diffraction | A, B | ZN | — |
| 6ASY | BIP-ATP2 | x-ray diffraction | A, B | ATP, SO4, PO4 | — |
| 6CZ1 | Crystal structure of ATPase domain of human GRP78 bound to VER155008 | x-ray diffraction | A, B | 3FD, MG | — |
| 6DFM | Crystal structure of human GRP78 in complex with 8-aminoadenosine | x-ray diffraction | A, B | 3BH | — |
| 6DFO | Crystal structure of human GRP78 in complex with 8-bromoadenosine | x-ray diffraction | A, B | GBA | 9 (best 0.77) |
| 6DFO | Crystal structure of human GRP78 in complex with 8-bromoadenosine | x-ray diffraction | A, B | GBA | — |
| 6DO2 | Crystal structure of human GRP78 in complex with 7-deaza-2'-C- methyladenosine | x-ray diffraction | A, B | H5V | — |
| 6DWS | Crystal structure of human GRP78 in complex with (2R,3R,4S,5R)-2-(6… | x-ray diffraction | A, B | HFY, MG | — |
| 6ZMD | Crystal structure of hype covalently tethered to bip bound to AMP-pnp | x-ray diffraction | A | ANP, QMK, MG, PO4 | — |
| 7N1R | A novel and unique ATP hydrolysis to AMP by a human HSP70 bip | x-ray diffraction | A, B | SO4, PO4, MG, AMP | — |
| P11021 | AlphaFold monomer V2.0 prediction for endoplasmic reticulum chaperone bip (P11021) | predicted | A | — | — |
Ligands
- ZN · Zinc ion · in 12 records
- MG · Magnesium ion · in 8 records
- PO4 · Phosphate ion · in 6 records
- SO4 · Sulfate ion · in 3 records
- ATP · Adenosine-5'-triphosphate · in 2 records
- DTP · 2'-deoxyadenosine 5'-triphosphate · in 2 records
- GBA · 8-bromoadenosine · in 2 records
- 3BH · (2R,3R,4S,5R)-2-(6,8-diaminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol · in 1 record
- 3FD · 4-[[(2R,3S,4R,5R)-5-[6-amino-8-[(3,4-dichlorophenyl) methylamino]purin-9-yl]-3,4-dihydroxy-oxolan-2-yl]methoxymethyl]benzonitrile · in 1 record
- 7DD · 7-deazaadenosine-5'-diphosphate · in 1 record
- 7DT · 7-deazaadenosine-5'-triphosphate · in 1 record
- ACP · Phosphomethylphosphonic acid adenylate ester · in 1 record
- ADP · Adenosine-5'-diphosphate · in 1 record
- AMP · Adenosine monophosphate · in 1 record
- ANP · Phosphoaminophosphonic acid-adenylate ester · in 1 record
- DAT · 2'-deoxyadenosine-5'-diphosphate · in 1 record
- H5V · 7-(2-C-methyl-beta-D-ribofuranosyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine · in 1 record
- HFY · 8-{[(2-chlorophenyl)methyl]amino}adenosine · in 1 record
- QMK · ~{N}-[2-[1-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$L^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-1,2,3-triazol-4-yl]ethyl]ethanamide · in 1 record
Experiment against prediction
- 6ZMD chain A against the predicted model P11021: TM-score 0.98, RMSD 1.11 Å
- 6ASY chain B against the predicted model P11021: TM-score 0.96, RMSD 1.91 Å
- 6ASY chain A against the predicted model P11021: TM-score 0.96, RMSD 1.95 Å
- 7N1R chain B against the predicted model P11021: TM-score 0.96, RMSD 1.94 Å
- 7N1R chain A against the predicted model P11021: TM-score 0.96, RMSD 1.99 Å
- 5YPE chain C against the predicted model Q13501: TM-score 0.94, RMSD 0.54 Å
- 5E84 chain D against the predicted model P11021: TM-score 0.93, RMSD 2.49 Å
- 5E84 chain D against the predicted model P11021: TM-score 0.93, RMSD 2.49 Å
- 5YPF chain C against the predicted model Q13501: TM-score 0.93, RMSD 0.60 Å
- 5YPF chain C against the predicted model Q13501: TM-score 0.93, RMSD 0.60 Å
Elsewhere
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