UniProt P0CH09

Ubiquitin-60S ribosomal protein L40,Histone H2A (P0CH09)

Ubiquitin-60S ribosomal protein L40,Histone H2A (UniProt P0CH09): 6 experimental structures and 1 predicted model on GenesisL1, 25 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.

UniProt: P0CH09
Protein: Ubiquitin-60S ribosomal protein L40,Histone H2A
Experimental structures: 6
Predicted models: 1
Pockets: 25 · 2 records with a druggable one

Structures

7 records of P0CH09 in the MolNFT archive: 6 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
6NZO	Set2 bound to nucleosome	electron microscopy	C, G	—	—
6NZO	SET2 bound to nucleosome	electron microscopy	C, G	—	—
6PX1	Set2 bound to nucleosome	electron microscopy	C, G	—	12 (best 0.82)
6PX1	SET2 bound to nucleosome	electron microscopy	C, G	—	—
6PX3	Set2 bound to nucleosome	electron microscopy	C, G	—	13 (best 0.83)
6PX3	SET2 bound to nucleosome	electron microscopy	C, G	—	—
P0CH09	AlphaFold monomer V2.0 prediction for ubiquitin-60S ribosomal protein L40 (P0CH09)	predicted	A	—	—

Experiment against prediction

6PX3 chain C against the predicted model P0CH09: TM-score 0.42, RMSD 1.81 Å
6PX3 chain C against the predicted model P0CH09: TM-score 0.42, RMSD 1.81 Å
6NZO chain C against the predicted model P0CH09: TM-score 0.31, RMSD 4.92 Å
6NZO chain C against the predicted model P0CH09: TM-score 0.31, RMSD 4.92 Å
6PX1 chain C against the predicted model P0CH09: TM-score 0.31, RMSD 4.44 Å
6PX1 chain C against the predicted model P0CH09: TM-score 0.31, RMSD 4.44 Å
6NZO chain G against the predicted model P0CH09: TM-score 0.30, RMSD 4.48 Å
6NZO chain G against the predicted model P0CH09: TM-score 0.30, RMSD 4.48 Å
6PX3 chain G against the predicted model P0CH09: TM-score 0.30, RMSD 4.48 Å
6PX3 chain G against the predicted model P0CH09: TM-score 0.30, RMSD 4.48 Å

Elsewhere

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