UniProt P0AFD6
NADH-quinone oxidoreductase subunit I (P0AFD6)
NADH-quinone oxidoreductase subunit I (UniProt P0AFD6), EC 7.1.1.2: 7 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 12 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P0AFD6
- Protein
- NADH-quinone oxidoreductase subunit I
- EC
- 7.1.1.2
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 12 · 3 records with a druggable one
Structures
8 records of P0AFD6 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7NYR | Respiratory complex I from Escherichia coli - conformation 1 | electron microscopy | I | SF4 | 3 (best 0.79) |
| 7NYR | Respiratory complex I from escherichia COLI - conformation 1 | electron microscopy | I | SF4 | — |
| 7NYU | Respiratory complex I from Escherichia coli - conformation 2 | electron microscopy | I | SF4 | 4 (best 0.82) |
| 7NYU | Respiratory complex I from escherichia COLI - conformation 2 | electron microscopy | I | SF4 | — |
| 7NYV | Respiratory complex I from Escherichia coli - conformation 3 | electron microscopy | I | SF4 | 5 (best 0.80) |
| 7NYV | Respiratory complex I from escherichia COLI - conformation 3 | electron microscopy | I | SF4 | — |
| 7NZ1 | Respiratory complex I from escherichia COLI - focused refinement of cytoplasmic arm | electron microscopy | I | SF4 | — |
| P0AFD6 | AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit I (P0AFD6) | predicted | A | — | — |
Ligands
- SF4 · Iron/sulfur cluster · in 7 records
Experiment against prediction
- 7NZ1 chain I against the predicted model P0AFD6: TM-score 0.90, RMSD 2.08 Å
- 7NYR chain I against the predicted model P0AFD6: TM-score 0.85, RMSD 2.83 Å
- 7NYR chain I against the predicted model P0AFD6: TM-score 0.85, RMSD 2.83 Å
- 7NYU chain I against the predicted model P0AFD6: TM-score 0.84, RMSD 2.69 Å
- 7NYU chain I against the predicted model P0AFD6: TM-score 0.84, RMSD 2.69 Å
- 7NYV chain I against the predicted model P0AFD6: TM-score 0.84, RMSD 2.40 Å
- 7NYV chain I against the predicted model P0AFD6: TM-score 0.84, RMSD 2.40 Å
Elsewhere
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