UniProt P0AD49
Ribosome-associated inhibitor A (P0AD49)
Ribosome-associated inhibitor A (UniProt P0AD49): 16 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0AD49
- Protein
- Ribosome-associated inhibitor A
- Experimental structures
- 16
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 5 · 4 records with a druggable one
Structures
17 records of P0AD49 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1L4S | Solution structure of ribosome associated factor Y | solution nmr | A | — | — |
| 1L4S | Solution structure of ribosome associated factor Y | solution nmr | A | — | — |
| 1N3G | Solution structure of the ribosome-associated cold shock response protein Yfia of Escherichia coli | solution nmr | A | — | — |
| 1N3G | Solution structure of the ribosome-associated cold shock response protein yfia of escherichia COLI | solution nmr | A | — | — |
| 4V8I | Crystal structure of YfiA bound to the 70S ribosome. | x-ray diffraction | AY, CY | — | — |
| 4Y4O | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to… | x-ray diffraction | 1y, 2y | — | — |
| 5FDU | Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S… | x-ray diffraction | 1x, 2x | MG | — |
| 5FDV | Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S… | x-ray diffraction | 2x, 1x | MG | — |
| 6FKR | Crystal structure of the dolphin proline-rich antimicrobial peptide Tur1A bound to the Thermus… | x-ray diffraction | 1z, 2z | MG | — |
| 7MD7 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium… | x-ray diffraction | 1y, 2y | MG | 2 (best 0.87) |
| 7RQC | Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site… | x-ray diffraction | 1y, 2y | MG | — |
| 8FC1 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A… | x-ray diffraction | 1y, 2y | MG | 1 (best 0.89) |
| 8FC4 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with… | x-ray diffraction | 1y, 2y | MG | 1 (best 0.89) |
| 8FC6 | Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with… | x-ray diffraction | 1y, 2y | MG | — |
| 8T8C | Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site… | x-ray diffraction | 1y, 2y | MG | — |
| 8VTW | Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone… | x-ray diffraction | 1y, 2y | MG | 1 (best 0.86) |
| P0AD49 | AlphaFold monomer V2.0 prediction for ribosome-associated inhibitor a (P0AD49) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 10 records
Experiment against prediction
- 8FC6 chain 1y against the predicted model P0AD49: TM-score 0.99, RMSD 0.50 Å
- 4Y4O chain 1y against the predicted model P0AD49: TM-score 0.99, RMSD 0.52 Å
- 8FC1 chain 1y against the predicted model P0AD49: TM-score 0.99, RMSD 0.50 Å
- 8FC4 chain 1y against the predicted model P0AD49: TM-score 0.99, RMSD 0.52 Å
- 8VTW chain 1y against the predicted model P0AD49: TM-score 0.99, RMSD 0.53 Å
- 5FDV chain 1x against the predicted model P0AD49: TM-score 0.98, RMSD 0.55 Å
- 5FDU chain 1x against the predicted model P0AD49: TM-score 0.98, RMSD 0.56 Å
- 6FKR chain 1z against the predicted model P0AD49: TM-score 0.98, RMSD 0.56 Å
- 7MD7 chain 1y against the predicted model P0AD49: TM-score 0.98, RMSD 0.57 Å
- 4V8I chain AY against the predicted model P0AD49: TM-score 0.98, RMSD 0.50 Å
Elsewhere
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