UniProt P0AC04
Outer membrane protein assembly factor BamD (P0AC04)
Outer membrane protein assembly factor BamD (UniProt P0AC04): 33 experimental structures and 1 predicted model on GenesisL1, 63 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0AC04
- Protein
- Outer membrane protein assembly factor BamD
- Experimental structures
- 33
- Predicted models
- 1
- Pockets
- 63 · 11 records with a druggable one
Structures
34 records of P0AC04 in the MolNFT archive: 33 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5LJO | E. coli BAM complex (BamABCDE) by cryoEM | electron microscopy | D | — | — |
| 5LJO | E. COLI bam complex (bamabcde) by cryoem | electron microscopy | D | — | — |
| 6SMX | BamABCDE in MSP1D1 nanodisc | electron microscopy | D | — | 4 (best 0.74) |
| 6SMX | Bamabcde in MSP1D1 nanodisc | electron microscopy | D | — | — |
| 6SN0 | BamABCDE in MSP1D1 nanodisc ensemble 0-1 | electron microscopy | D | — | 4 (best 0.74) |
| 6SN0 | Bamabcde in MSP1D1 nanodisc ensemble 0-1 | electron microscopy | D | — | — |
| 6SN2 | BamABCDE in MSP1D1 nanodisc ensemble 0-2 | electron microscopy | D | — | 5 (best 0.78) |
| 6SN2 | Bamabcde in MSP1D1 nanodisc ensemble 0-2 | electron microscopy | D | — | — |
| 6SN3 | BamABCDE in MSP1D1 nanodisc ensemble 0-3 | electron microscopy | D | — | 6 (best 0.76) |
| 6SN3 | Bamabcde in MSP1D1 nanodisc ensemble 0-3 | electron microscopy | D | — | — |
| 6SN4 | BamABCDE in MSP1D1 nanodisc ensemble 0-4 | electron microscopy | D | — | 5 (best 0.79) |
| 6SN4 | Bamabcde in MSP1D1 nanodisc ensemble 0-4 | electron microscopy | D | — | — |
| 6SN5 | BamABCDE in MSP1D1 nanodisc ensemble 0-5 | electron microscopy | D | — | 4 (best 0.79) |
| 6SN5 | Bamabcde in MSP1D1 nanodisc ensemble 0-5 | electron microscopy | D | — | — |
| 6SN7 | BamABCDE in MSP1D1 nanodisc ensemble 0-6 | electron microscopy | D | — | 5 (best 0.80) |
| 6SN7 | Bamabcde in MSP1D1 nanodisc ensemble 0-6 | electron microscopy | D | — | — |
| 6SN8 | Bamabcde in MSP1D1 nanodisc ensemble 0-7 | electron microscopy | D | — | — |
| 6SN9 | BamABCDE in MSP1D1 nanodisc ensemble 0-8 | electron microscopy | D | — | 5 (best 0.75) |
| 6SN9 | Bamabcde in MSP1D1 nanodisc ensemble 0-8 | electron microscopy | D | — | — |
| 6SO7 | BamABCDE in MSP1D1 nanodisc ensemble 1-2 | electron microscopy | D | — | 5 (best 0.41) |
| 6SO7 | Bamabcde in MSP1D1 nanodisc ensemble 1-2 | electron microscopy | D | — | — |
| 6SO8 | Bamabcde in MSP1D1 nanodisc ensemble 1-3 | electron microscopy | D | — | — |
| 6SOA | BamABCDE in MSP1D1 nanodisc ensemble 0-9 | electron microscopy | D | — | 5 (best 0.43) |
| 6SOA | Bamabcde in MSP1D1 nanodisc ensemble 0-9 | electron microscopy | D | — | — |
| 6SOB | Bamabcde in MSP1D1 nanodisc ensemble 1-4 | electron microscopy | D | — | — |
| 6SOC | BamABCDE in MSP1D1 nanodisc ensemble 1-5 | electron microscopy | D | — | 4 (best 0.78) |
| 6SOC | Bamabcde in MSP1D1 nanodisc ensemble 1-5 | electron microscopy | D | — | — |
| 6SOG | BamABCDE in MSP1D1 nanodisc ensemble 1-6 | electron microscopy | D | — | 6 (best 0.79) |
| 6SOG | Bamabcde in MSP1D1 nanodisc ensemble 1-6 | electron microscopy | D | — | — |
| 6SOH | BamABCDE in MSP1D1 nanodisc ensemble 1-7 | electron microscopy | D | — | 4 (best 0.74) |
| 6SOH | Bamabcde in MSP1D1 nanodisc ensemble 1-7 | electron microscopy | D | — | — |
| 6SOJ | BamABCDE in MSP1D1 nanodisc ensemble 1-8 | electron microscopy | D | — | 1 (best 0.44) |
| 6SOJ | Bamabcde in MSP1D1 nanodisc ensemble 1-8 | electron microscopy | D | — | — |
| P0AC04 | AlphaFold monomer V2.0 prediction for outer membrane protein assembly factor bamd (P0AC04) | predicted | A | — | — |
Experiment against prediction
- 5LJO chain D against the predicted model P0AC04: TM-score 0.97, RMSD 1.07 Å
- 5LJO chain D against the predicted model P0AC04: TM-score 0.97, RMSD 1.07 Å
- 6SOB chain D against the predicted model P0AC04: TM-score 0.96, RMSD 1.16 Å
- 6SOG chain D against the predicted model P0AC04: TM-score 0.96, RMSD 1.16 Å
- 6SOG chain D against the predicted model P0AC04: TM-score 0.96, RMSD 1.16 Å
- 6SN7 chain D against the predicted model P0AC04: TM-score 0.96, RMSD 1.22 Å
- 6SN7 chain D against the predicted model P0AC04: TM-score 0.96, RMSD 1.22 Å
- 6SN5 chain D against the predicted model P0AC04: TM-score 0.95, RMSD 1.29 Å
- 6SN5 chain D against the predicted model P0AC04: TM-score 0.95, RMSD 1.29 Å
- 6SN8 chain D against the predicted model P0AC04: TM-score 0.95, RMSD 1.28 Å
Elsewhere
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