UniProt P0ABJ1
Cytochrome bo(3) ubiquinol oxidase subunit 2 (P0ABJ1)
Cytochrome bo(3) ubiquinol oxidase subunit 2 (UniProt P0ABJ1): 15 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 44 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P0ABJ1
- Protein
- Cytochrome bo(3) ubiquinol oxidase subunit 2
- Experimental structures
- 15
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 44 · 6 records with a druggable one
Structures
16 records of P0ABJ1 in the MolNFT archive: 15 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1CYW | Quinol oxidase (periplasmic fragment of subunit II) (cyoa) | x-ray diffraction | A | — | — |
| 1CYW | Quinol oxidase (periplasmic fragment of subunit II) (cyoa) | x-ray diffraction | A | — | — |
| 1CYX | Quinol oxidase (periplasmic fragment of subunit II with engineered cu-a binding SITE)(CYOA) | x-ray diffraction | A | — | — |
| 1CYX | Quinol oxidase (periplasmic fragment of subunit II with engineered cu- a binding SITE)(CYOA) | x-ray diffraction | A | — | — |
| 1FFT | The structure of ubiquinol oxidase from Escherichia coli | x-ray diffraction | B, G | — | — |
| 1FFT | The structure of ubiquinol oxidase from escherichia COLI | x-ray diffraction | B, G | — | — |
| 7CUB | 2.55-Angstrom Cryo-EM structure of Cytochrome bo3 from Escherichia coli in Native Membrane | electron microscopy | B | HEO | 7 (best 0.90) |
| 7CUB | 2.55-ångström cryo-EM structure of cytochrome BO3 from escherichia COLI in native membrane | electron microscopy | B | HEO | — |
| 7CUQ | 2.55-ångström cryo-EM structure of cytochrome BO3 from escherichia COLI in native membrane | electron microscopy | B | HEO | — |
| 7CUW | Ubiquinol Binding Site of Cytochrome bo3 from Escherichia coli | electron microscopy | B | HEO | 7 (best 0.90) |
| 7CUW | Ubiquinol binding site of cytochrome BO3 from escherichia COLI | electron microscopy | B | HEO | — |
| 8F68 | E. coli cytochrome bo3 ubiquinol oxidase monomer | electron microscopy | B | HEO | 6 (best 0.90) |
| 8F6C | E. coli cytochrome bo3 ubiquinol oxidase dimer | electron microscopy | B, F | HEO | 10 (best 0.91) |
| 8GO3 | Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent | electron microscopy | B | HEO | 6 (best 0.90) |
| 8QQK | Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs | electron microscopy | B | HEO | 8 (best 0.91) |
| P0ABJ1 | AlphaFold monomer V2.0 prediction for cytochrome BO(3) ubiquinol oxidase subunit 2 (P0ABJ1) | predicted | A | — | — |
Ligands
- HEO · Heme O · in 9 records
Experiment against prediction
- 1CYX chain A against the predicted model P0ABJ1: TM-score 0.99, RMSD 0.58 Å
- 1CYX chain A against the predicted model P0ABJ1: TM-score 0.99, RMSD 0.58 Å
- 7CUW chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.91 Å
- 7CUW chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.91 Å
- 7CUB chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.91 Å
- 7CUB chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.91 Å
- 1CYW chain A against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.92 Å
- 1CYW chain A against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.92 Å
- 7CUQ chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 0.94 Å
- 8F68 chain B against the predicted model P0ABJ1: TM-score 0.98, RMSD 1.04 Å
Elsewhere
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