UniProt P09945

Hirudin variant-2 (P09945)

Hirudin variant-2 (UniProt P09945): 218 experimental structures and 1 predicted model on GenesisL1, 20 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.

UniProt: P09945
Protein: Hirudin variant-2
Experimental structures: 218
Predicted models: 1
Pockets: 20 · 19 records with a druggable one

Structures

219 records of P09945 in the MolNFT archive: 218 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
1A2C	Structure of thrombin inhibited by AERUGINOSIN298-A from a BLUE-GREEN ALGA	x-ray diffraction	I	—	—
1A2C	Structure of thrombin inhibited by AERUGINOSIN298-a from a blue-green alga	x-ray diffraction	I	—	—
1A46	Thrombin complexed with hirugen and a beta-strand mimetic inhibitor	x-ray diffraction	I	—	—
1A46	Thrombin complexed with hirugen and a beta-strand mimetic inhibitor	x-ray diffraction	I	—	—
1A4W	Crystal structures of thrombin with thiazole-containing inhibitors: probes of the S1' binding site	x-ray diffraction	I	—	—
1A4W	Crystal structures of thrombin with thiazole-containing inhibitors: probes of the S1' binding site	x-ray diffraction	I	—	—
1A5G	Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen	x-ray diffraction	I	—	—
1A5G	Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen	x-ray diffraction	I	—	—
1A61	Thrombin complexed with a beta-mimetic thiazole-containing inhibitor	x-ray diffraction	I	—	—
1A61	Thrombin complexed with a beta-mimetic thiazole-containing inhibitor	x-ray diffraction	I	—	—
1B5G	Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen	x-ray diffraction	I	—	—
1B5G	Human thrombin complexed with novel synthetic peptide mimetic inhibitor and hirugen	x-ray diffraction	I	—	—
1DOJ	Crystal structure of human alpha-thrombin*RWJ-51438 complex at 1.7 A	x-ray diffraction	B	—	—
1DOJ	Crystal structure of human alpha-THROMBIN*RWJ-51438 complex at 1.7 a	x-ray diffraction	B	—	—
1HGT	Structure of the hirugen and hirulog 1 complexes of alpha-thrombin	x-ray diffraction	I	—	—
1HGT	Structure of the hirugen and hirulog 1 complexes of alpha- thrombin	x-ray diffraction	I	—	—
1K21	Human thrombin-inhibitor complex	x-ray diffraction	I	—	—
1K21	Human thrombin-inhibitor complex	x-ray diffraction	I	—	—
1K22	Human thrombin-inhibitor complex	x-ray diffraction	I	—	—
1K22	Human thrombin-inhibitor complex	x-ray diffraction	I	—	—
1NRS	Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of…	x-ray diffraction	I	—	—
1NRS	Crystallographic structures of thrombin complexed with thrombin receptor peptides: existence of…	x-ray diffraction	I	—	—
1TBZ	Human thrombin with active site N-methyl-D phenylalanyl-N-[5-(AMINOIMINOMETHYL)AMINO]-1-{{BENZOTHIAZ…	x-ray diffraction	I	—	—
1TBZ	Human thrombin with active site N-methyl-D phenylalanyl-N-[5…	x-ray diffraction	I	—	—
1TMB	Molecular basis for the inhibition of human alpha-thrombin by the macrocyclic peptide…	x-ray diffraction	I	—	—
1TMB	Molecular basis for the inhibition of human alpha-thrombin by the macrocyclic peptide…	x-ray diffraction	I	—	—
1TMU	Changes in interactions in complexes of hirudin derivatives and human alpha-thrombin due to…	x-ray diffraction	J	—	—
1TMU	Changes in interactions in complexes of hirudin derivatives and human alpha-thrombin due to…	x-ray diffraction	J	—	—
1VZQ	Complex of thrombin with designed inhibitor 7165	x-ray diffraction	I	—	—
1VZQ	Complex of thrombin with designed inhibitor 7165	x-ray diffraction	I	—	—
1W7G	Alpha-thrombin complex with sulfated hirudin (residues 54-65) and L- Arginine template inhibitor…	x-ray diffraction	I	—	—
1W7G	Alpha-thrombin complex with sulfated hirudin (residues 54-65) and L- arginine template inhibitor…	x-ray diffraction	I	—	—
1WBG	Active site thrombin inhibitors	x-ray diffraction	I	—	—
1WBG	Active site thrombin inhibitors	x-ray diffraction	I	—	—
2BVR	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket	x-ray diffraction	I	—	—
2BVR	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket	x-ray diffraction	I	—	—
2BVS	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket	x-ray diffraction	I	—	—
2BVS	Human thrombin complexed with fragment-based small molecules occupying the S1 pocket	x-ray diffraction	I	—	—
2BVX	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker	x-ray diffraction	I	—	—
2BVX	Design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic P1-P2-linker	x-ray diffraction	I	—	—
2BXT	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker	x-ray diffraction	I	—	—
2BXT	Design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic P1-P2-linker	x-ray diffraction	I	—	—
2BXU	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker	x-ray diffraction	I	—	—
2BXU	Design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic P1-P2-linker	x-ray diffraction	I	—	—
2C8W	thrombin inhibitors	x-ray diffraction	I	—	—
2C8W	Thrombin inhibitors	x-ray diffraction	I	—	—
2C8X	thrombin inhibitors	x-ray diffraction	I	—	—
2C8X	Thrombin inhibitors	x-ray diffraction	I	—	—
2C8Y	thrombin inhibitors	x-ray diffraction	I	—	—
2C8Y	Thrombin inhibitors	x-ray diffraction	I	—	—
2C8Z	thrombin inhibitors	x-ray diffraction	I	—	—
2C8Z	Thrombin inhibitors	x-ray diffraction	I	—	—
2C90	thrombin inhibitors	x-ray diffraction	I	—	—
2C90	Thrombin inhibitors	x-ray diffraction	I	—	—
2C93	thrombin inhibitors	x-ray diffraction	I	—	—
2C93	Thrombin inhibitors	x-ray diffraction	I	—	—
2ZFQ	Exploring thrombin S3 pocket	x-ray diffraction	I	—	—
2ZFQ	Exploring thrombin S3 pocket	x-ray diffraction	I	—	—
2ZFR	Exploring thrombin S3 pocket	x-ray diffraction	I	—	—
2ZFR	Exploring thrombin S3 pocket	x-ray diffraction	I	—	—

159 records more on the page itself.

Experiment against prediction

4UFD chain I against the predicted model P09945: TM-score 1.00, RMSD 0.02 Å
4HTC chain I against the predicted model P09945: TM-score 0.85, RMSD 1.45 Å
3HTC chain I against the predicted model P09945: TM-score 0.84, RMSD 1.52 Å
1VZQ chain I against the predicted model P09945: TM-score 0.81, RMSD 0.25 Å
1VZQ chain I against the predicted model P09945: TM-score 0.81, RMSD 0.25 Å
4LOY chain I against the predicted model P09945: TM-score 0.62, RMSD 0.54 Å
2C93 chain I against the predicted model P09945: TM-score 0.61, RMSD 0.53 Å
1TMU chain J against the predicted model P09945: TM-score 0.58, RMSD 0.54 Å
1TMU chain J against the predicted model P09945: TM-score 0.58, RMSD 0.54 Å
1TMB chain I against the predicted model P09945: TM-score 0.58, RMSD 0.65 Å

Elsewhere

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