UniProt P09087
Homeobox protein abdominal-B (P09087)
Homeobox protein abdominal-B (UniProt P09087): 8 experimental structures and 1 predicted model on GenesisL1, 10 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P09087
- Protein
- Homeobox protein abdominal-B
- Experimental structures
- 8
- Predicted models
- 1
- Pockets
- 10 · 4 records with a druggable one
Structures
9 records of P09087 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5ZJQ | Structure of AbdB/Exd complex bound to a 'Red14' DNA sequence | x-ray diffraction | A | — | 2 (best 0.75) |
| 5ZJQ | Structure of ABDB/EXD complex bound to a 'RED14' DNA sequence | x-ray diffraction | A | — | — |
| 5ZJR | Structure of AbdB/Exd complex bound to a 'Magenta14' DNA sequence | x-ray diffraction | A | — | 2 (best 0.72) |
| 5ZJR | Structure of ABDB/EXD complex bound to a 'MAGENTA14' DNA sequence | x-ray diffraction | A | — | — |
| 5ZJS | Structure of AbdB/Exd complex bound to a 'Blue14' DNA sequence | x-ray diffraction | A | — | 2 (best 0.72) |
| 5ZJS | Structure of ABDB/EXD complex bound to a 'BLUE14' DNA sequence | x-ray diffraction | A | — | — |
| 5ZJT | Structure of AbdB/Exd complex bound to a 'Black14' DNA sequence | x-ray diffraction | A, E | — | 4 (best 0.68) |
| 5ZJT | Structure of ABDB/EXD complex bound to a 'BLACK14' DNA sequence | x-ray diffraction | A, E | — | — |
| P09087 | AlphaFold monomer V2.0 prediction for homeobox protein abdominal-B (P09087) | predicted | A | — | — |
Experiment against prediction
- 5ZJT chain E against the predicted model P09087: TM-score 0.95, RMSD 0.73 Å
- 5ZJT chain E against the predicted model P09087: TM-score 0.95, RMSD 0.73 Å
- 5ZJS chain A against the predicted model P09087: TM-score 0.94, RMSD 0.98 Å
- 5ZJS chain A against the predicted model P09087: TM-score 0.94, RMSD 0.98 Å
- 5ZJQ chain A against the predicted model P09087: TM-score 0.93, RMSD 0.95 Å
- 5ZJQ chain A against the predicted model P09087: TM-score 0.93, RMSD 0.95 Å
- 5ZJR chain A against the predicted model P09087: TM-score 0.90, RMSD 1.40 Å
- 5ZJR chain A against the predicted model P09087: TM-score 0.90, RMSD 1.40 Å
- 5ZJT chain A against the predicted model P09087: TM-score 0.89, RMSD 1.21 Å
- 5ZJT chain A against the predicted model P09087: TM-score 0.89, RMSD 1.21 Å
Elsewhere
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