UniProt P08307
Circumsporozoite protein NPDP peptide (P08307)
Circumsporozoite protein NPDP peptide (UniProt P08307): 11 experimental structures and 1 predicted model on GenesisL1, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P08307
- Protein
- Circumsporozoite protein NPDP peptide
- Experimental structures
- 11
- Predicted models
- 1
- Pockets
- 5 · 2 records with a druggable one
Structures
12 records of P08307 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7UFN | Structure of PfCSP peptide 21 with antibody P3-21 | x-ray diffraction | E, F | — | 2 (best 0.58) |
| 7UFO | Structure of PfCSP peptide 21 with antibody P3-42 | x-ray diffraction | A | — | — |
| 8F95 | Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein DND peptide | x-ray diffraction | C, P | — | — |
| 8F9S | Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NDN peptide | x-ray diffraction | C, P | — | — |
| 8F9U | Crystal structure of Ky15.7 Fab in complex with circumsporozoite protein NPDP peptide | x-ray diffraction | P | — | — |
| 8F9W | Crystal structure of Ky15.8 Fab in complex with circumsporozoite protein NPDP peptide | x-ray diffraction | O, P, Q, R | — | — |
| 8FA8 | Crystal structure of Ky15.11 Fab in complex with circumsporozoite protein NDN peptide | x-ray diffraction | P | — | 1 (best 0.25) |
| 8FAT | Crystal structure of Ky224 Fab in complex with circumsporozoite protein NPDP peptide | x-ray diffraction | E, F | — | — |
| 8FB7 | Crystal structure of Ky15.10 Fab in complex with circumsporozoite protein NPDP peptide | x-ray diffraction | P, Q | — | — |
| 8FBA | Crystal structure of Ky315 Fab in complex with circumsporozoite protein DND peptide | x-ray diffraction | P, Q | — | 2 (best 0.68) |
| 8FDD | Crystal structure of Ky15.3 Fab in complex with circumsporozoite protein NPDP peptide | x-ray diffraction | P | — | — |
| P08307 | AlphaFold monomer V2.0 prediction for circumsporozoite protein (P08307) | predicted | A | — | — |
Experiment against prediction
- 8F9W chain R against the predicted model P08307: TM-score 0.59, RMSD 0.78 Å
- 8F9W chain P against the predicted model P08307: TM-score 0.54, RMSD 1.58 Å
- 8FA8 chain P against the predicted model P08307: TM-score 0.53, RMSD 1.95 Å
- 8F9W chain Q against the predicted model P08307: TM-score 0.46, RMSD 1.66 Å
- 8F9W chain O against the predicted model P08307: TM-score 0.44, RMSD 1.59 Å
- 8FB7 chain P against the predicted model P08307: TM-score 0.44, RMSD 1.69 Å
- 8FBA chain Q against the predicted model P08307: TM-score 0.43, RMSD 1.35 Å
- 8F9S chain P against the predicted model P08307: TM-score 0.41, RMSD 1.42 Å
- 8F9S chain C against the predicted model P08307: TM-score 0.40, RMSD 1.31 Å
- 8FBA chain P against the predicted model P08307: TM-score 0.38, RMSD 1.34 Å
Elsewhere
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