UniProt P08100
Endolysin,Rhodopsin,S-arrestin (P08100)
Endolysin,Rhodopsin,S-arrestin (UniProt P08100), EC 3.2.1.17: 9 experimental structures on GenesisL1, 1 ligand bound, 64 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- P08100
- Protein
- Endolysin,Rhodopsin,S-arrestin
- EC
- 3.2.1.17
- Experimental structures
- 9
- Predicted models
- 0
- Ligands
- 1
- Pockets
- 64 · 4 records with a druggable one
Structures
9 records of P08100 in the MolNFT archive: 9 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4ZWJ | Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser | x-ray diffraction | A, B, C, D | — | 20 (best 0.85) |
| 4ZWJ | Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser | x-ray diffraction | A, B, C, D | — | — |
| 5DGY | Crystal structure of rhodopsin bound to visual arrestin | x-ray diffraction | A, B, C, D | — | 20 (best 0.86) |
| 5DGY | Crystal structure of rhodopsin bound to visual arrestin | x-ray diffraction | A, B, C, D | — | — |
| 5W0P | Crystal structure of rhodopsin bound to visual arrestin determined by X-ray free electron laser | x-ray diffraction | A, B, C, D | NAG | 20 (best 0.81) |
| 5W0P | Crystal structure of rhodopsin bound to visual arrestin determined by X-ray free electron laser | x-ray diffraction | A, B, C, D | NAG | — |
| 6CMO | Rhodopsin-Gi complex | electron microscopy | R | NAG | 4 (best 0.88) |
| 6CMO | Rhodopsin-gi complex | electron microscopy | R | NAG | — |
| P08100 | AlphaFold monomer V2.0 prediction for rhodopsin (P08100) | — | — | — |
Ligands
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 4 records
Experiment against prediction
- 5W0P chain D against the predicted model P20443: TM-score 0.44, RMSD 1.95 Å
- 5W0P chain D against the predicted model P20443: TM-score 0.44, RMSD 1.95 Å
- 5W0P chain A against the predicted model P20443: TM-score 0.40, RMSD 2.03 Å
- 5W0P chain A against the predicted model P20443: TM-score 0.40, RMSD 2.03 Å
- 5W0P chain C against the predicted model P20443: TM-score 0.40, RMSD 2.05 Å
- 5W0P chain C against the predicted model P20443: TM-score 0.40, RMSD 2.05 Å
- 5W0P chain B against the predicted model P20443: TM-score 0.42, RMSD 2.00 Å
- 5W0P chain B against the predicted model P20443: TM-score 0.42, RMSD 2.00 Å
- 4ZWJ chain B against the predicted model P20443: TM-score 0.50, RMSD 1.94 Å
- 4ZWJ chain B against the predicted model P20443: TM-score 0.50, RMSD 1.94 Å
Elsewhere
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