UniProt P04964
P04964
P04964 (UniProt P04964): 12 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P04964
- Experimental structures
- 12
- Predicted models
- 1
- Ligands
- 1
Structures
13 records of P04964 in the MolNFT archive: 12 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1DAP | C. glutamicum dap dehydrogenase in complex with NADP+ | x-ray diffraction | A, B | — | — |
| 1DAP | C. glutamicum dap dehydrogenase in complex with NADP+ | x-ray diffraction | A, B | — | — |
| 1F06 | Three dimensional structure of the ternary complex of corynebacterium glutamicum diaminopimelate… | x-ray diffraction | A, B | — | — |
| 1F06 | Three dimensional structure of the ternary complex of corynebacterium glutamicum diaminopimelate… | x-ray diffraction | A, B | — | — |
| 2DAP | C. glutamicum dap dehydrogenase in complex with dap | x-ray diffraction | A | — | — |
| 2DAP | C. glutamicum dap dehydrogenase in complex with dap | x-ray diffraction | A | — | — |
| 3DAP | C. glutamicum dap dehydrogenase in complex with NADP+ and the inhibitor 5S-isoxazoline | x-ray diffraction | A, B | — | — |
| 3DAP | C. glutamicum dap dehydrogenase in complex with NADP+ and the inhibitor 5S-isoxazoline | x-ray diffraction | A, B | — | — |
| 5LOA | Crystal structure of the engineered D-Amino Acid Dehydrogenase (DAADH) bound to NADP+ | x-ray diffraction | A, B | NAP | — |
| 5LOA | Crystal structure of the engineered D-amino acid dehydrogenase (daadh) bound to NADP+ | x-ray diffraction | A, B | NAP | — |
| 5LOC | Crystal structure of the engineered D-Amino Acid Dehydrogenase (DAADH) | x-ray diffraction | A, B | — | — |
| 5LOC | Crystal structure of the engineered D-amino acid dehydrogenase (daadh) | x-ray diffraction | A, B | — | — |
| P04964 | AlphaFold monomer V2.0 prediction for meso-diaminopimelate D-dehydrogenase (P04964) | predicted | A | — | — |
Ligands
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · in 2 records
Experiment against prediction
- 2DAP chain A against the predicted model P04964: TM-score 0.96, RMSD 1.26 Å
- 2DAP chain A against the predicted model P04964: TM-score 0.97, RMSD 1.26 Å
- 5LOC chain B against the predicted model P04964: TM-score 0.95, RMSD 1.55 Å
- 5LOC chain B against the predicted model P04964: TM-score 0.95, RMSD 1.55 Å
- 5LOC chain A against the predicted model P04964: TM-score 0.95, RMSD 1.64 Å
- 5LOC chain A against the predicted model P04964: TM-score 0.95, RMSD 1.64 Å
- 1F06 chain A against the predicted model P04964: TM-score 0.92, RMSD 2.05 Å
- 1F06 chain A against the predicted model P04964: TM-score 0.92, RMSD 2.05 Å
- 3DAP chain A against the predicted model P04964: TM-score 0.92, RMSD 2.06 Å
- 3DAP chain A against the predicted model P04964: TM-score 0.92, RMSD 2.06 Å
Elsewhere
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