UniProt P04552
Egg-lysin (P04552)
Egg-lysin (UniProt P04552): 21 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P04552
- Protein
- Egg-lysin
- Experimental structures
- 21
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 4 · 1 record with a druggable one
Structures
22 records of P04552 in the MolNFT archive: 21 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1LIS | The crystal structure of a fertilization protein | x-ray diffraction | A | — | — |
| 1LIS | The crystal structure of a fertilization protein | x-ray diffraction | A | — | — |
| 1LYN | Crystal structure and subunit dynamics of the lysin dimer: egg envelopes dissociate dimers, the… | x-ray diffraction | A, B | — | — |
| 1LYN | Crystal structure and subunit dynamics of the lysin dimer: egg envelopes dissociate dimers, the… | x-ray diffraction | A, B | — | — |
| 2LIS | High resolution structure of the red abalone lysin monomer | x-ray diffraction | A | — | — |
| 2LIS | High resolution structure of the red abalone lysin monomer | x-ray diffraction | A | — | — |
| 2LYN | High resolution structure of red abalone lysin dimer | x-ray diffraction | A, B, C, D | — | — |
| 2LYN | High resolution structure of red abalone lysin dimer | x-ray diffraction | A, B, C, D | — | — |
| 5II7 | In-house sulfur-SAD structure of orthorhombic red abalone lysin at 1.66 A resolution | x-ray diffraction | A | SO4 | — |
| 5II7 | In-house sulfur-sad structure of orthorhombic red abalone lysin at 1.66 a resolution | x-ray diffraction | A | — | — |
| 5II8 | Orthorhombic crystal structure of red abalone lysin at 0.99 A resolution | x-ray diffraction | A | SO4 | — |
| 5II8 | Orthorhombic crystal structure of red abalone lysin at 0.99 a resolution | x-ray diffraction | A | — | — |
| 5II9 | Monoclinic crystal structure of red abalone lysin at 2.11 A resolution | x-ray diffraction | A, B, C, D, E, F | — | 4 (best 0.72) |
| 5II9 | Monoclinic crystal structure of red abalone lysin at 2.11 a resolution | x-ray diffraction | A, B, C, D, E, F | — | — |
| 5IIA | Crystal structure of red abalone egg VERL repeat 3 in complex with sperm lysin at 1.7 A resolution… | x-ray diffraction | A, C, E, G | — | — |
| 5IIA | Crystal structure of red abalone egg verl repeat 3 in complex with sperm lysin at 1.7 a resolution… | x-ray diffraction | A, C, E, G | — | — |
| 5IIB | Crystal structure of red abalone egg VERL repeat 3 in complex with sperm lysin at 1.64 A resolution… | x-ray diffraction | A | GLC, FRU | — |
| 5IIB | Crystal structure of red abalone egg verl repeat 3 in complex with sperm lysin at 1.64 a resolution… | x-ray diffraction | A | — | — |
| 5MR3 | Crystal structure of red abalone egg VERL repeat 2 with linker in complex with sperm lysin at 1.8 A… | x-ray diffraction | A, C, E, G | — | — |
| 5MR3 | Crystal structure of red abalone egg verl repeat 2 with linker in complex with sperm lysin at 1.8 a… | x-ray diffraction | A, C, E, G | — | — |
| 5UTG | Red abalone lysin F104A | solution nmr | A | — | — |
| P04552 | AlphaFold monomer V2.0 prediction for egg-lysin (P04552) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5IIB chain A against the predicted model P04552: TM-score 0.97, RMSD 0.69 Å
- 5IIB chain A against the predicted model P04552: TM-score 0.97, RMSD 0.69 Å
- 2LYN chain B against the predicted model P04552: TM-score 0.96, RMSD 0.64 Å
- 2LYN chain B against the predicted model P04552: TM-score 0.96, RMSD 0.64 Å
- 5MR3 chain A against the predicted model P04552: TM-score 0.96, RMSD 0.64 Å
- 5MR3 chain A against the predicted model P04552: TM-score 0.96, RMSD 0.64 Å
- 5IIA chain C against the predicted model P04552: TM-score 0.96, RMSD 0.66 Å
- 5IIA chain C against the predicted model P04552: TM-score 0.96, RMSD 0.66 Å
- 5IIA chain E against the predicted model P04552: TM-score 0.96, RMSD 0.67 Å
- 5IIA chain E against the predicted model P04552: TM-score 0.96, RMSD 0.67 Å
Elsewhere
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