UniProt P02381
Ribosomal protein VAR1, mitochondrial (P02381)
Ribosomal protein VAR1, mitochondrial (UniProt P02381): 7 experimental structures and 1 predicted model on GenesisL1, 22 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P02381
- Protein
- Ribosomal protein VAR1, mitochondrial
- Experimental structures
- 7
- Predicted models
- 1
- Pockets
- 22 · 8 records with a druggable one
Structures
8 records of P02381 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5MRC | Structure of the yeast mitochondrial ribosome - Class A | electron microscopy | CC | — | 4 (best 0.87) |
| 5MRE | Structure of the yeast mitochondrial ribosome - Class B | electron microscopy | CC | — | 2 (best 0.87) |
| 5MRF | Structure of the yeast mitochondrial ribosome - Class C | electron microscopy | CC | — | 2 (best 0.86) |
| 8D8K | Yeast mitochondrial small subunit assembly intermediate (State 2) | electron microscopy | C | — | 1 (best 0.88) |
| 8D8L | Yeast mitochondrial small subunit assembly intermediate (State 3) | electron microscopy | C | — | 1 (best 0.89) |
| 8OM3 | Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23. | electron microscopy | C | — | 3 (best 0.87) |
| 8OM4 | Small subunit of yeast mitochondrial ribosome. | electron microscopy | C | — | 2 (best 0.86) |
| P02381 | AlphaFold monomer V2.0 prediction for ribosomal protein VAR1, mitochondrial (P02381) | predicted | A | — | 7 (best 0.62) |
Experiment against prediction
- 5MRF chain CC against the predicted model P02381: TM-score 0.76, RMSD 2.79 Å
- 5MRC chain CC against the predicted model P02381: TM-score 0.76, RMSD 2.79 Å
- 5MRE chain CC against the predicted model P02381: TM-score 0.76, RMSD 2.79 Å
- 8D8K chain C against the predicted model P02381: TM-score 0.73, RMSD 2.59 Å
- 8D8L chain C against the predicted model P02381: TM-score 0.72, RMSD 2.62 Å
- 8OM3 chain C against the predicted model P02381: TM-score 0.71, RMSD 2.88 Å
- 8OM4 chain C against the predicted model P02381: TM-score 0.71, RMSD 2.89 Å
Elsewhere
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