UniProt P00875
Ribulose bisphosphate carboxylase large chain (P00875)
Ribulose bisphosphate carboxylase large chain (UniProt P00875), EC 4.1.1.39: 21 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 44 pockets. Binding sites, druggability and experiment against…
- UniProt
- P00875
- Protein
- Ribulose bisphosphate carboxylase large chain
- EC
- 4.1.1.39
- Experimental structures
- 21
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 44 · 3 records with a druggable one
Structures
22 records of P00875 in the MolNFT archive: 21 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1AA1 | Activated spinach rubisco in complex with the product 3-phosphoglycerate | x-ray diffraction | L, B, E, H | — | — |
| 1AA1 | Activated spinach rubisco in complex with the product 3- phosphoglycerate | x-ray diffraction | L, B, E, H | — | — |
| 1AUS | Activated unliganded spinach rubisco | x-ray diffraction | L, M, N, O | — | — |
| 1AUS | Activated unliganded spinach rubisco | x-ray diffraction | L, M, N, O | — | — |
| 1IR1 | Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed… | x-ray diffraction | A, B, C, D | — | — |
| 1IR1 | Crystal structure of spinach ribulose-1,5-bisphosphate CARBOXYLASE/OXYGENASE (rubisco) complexed… | x-ray diffraction | A, B, C, D | — | — |
| 1RBO | Spinach rubisco in complex with the inhibitor 2-carboxyarabinitol-1,5-diphosphate | x-ray diffraction | L, B, E, H | — | — |
| 1RBO | Spinach rubisco in complex with the inhibitor 2-carboxyarabinitol-1,5- diphosphate | x-ray diffraction | L, B, E, H | — | — |
| 1RCO | Spinach rubisco in complex with the inhibitor D-xylulose-2,2-diol-1,5-bisphosphate | x-ray diffraction | L, B, E, H, K, O, R, V | — | — |
| 1RCO | Spinach rubisco in complex with the inhibitor D-xylulose-2, 2-diol-1,5-bisphosphate | x-ray diffraction | L, B, E, H, K, O, R, V | — | — |
| 1RCX | Non-activated spinach rubisco in complex with its substrate ribulose-1,5-bisphosphate | x-ray diffraction | L, B, E, H, K, O, R, V | — | — |
| 1RCX | Non-activated spinach rubisco in complex with its substrate ribulose-1,5-bisphosphate | x-ray diffraction | L, B, E, H, K, O, R, V | — | — |
| 1RXO | Activated spinach rubisco in complex with its substrate ribulose-1,5-bisphosphate and calcium | x-ray diffraction | L, B, E, H | — | — |
| 1RXO | Activated spinach rubisco in complex with its substrate ribulose-1,5- bisphosphate and calcium | x-ray diffraction | L, B, E, H | — | — |
| 1UPM | Activated spinach rubisco complexed with 2-carboxyarabinitol 2 bisphosphat and CA2+. | x-ray diffraction | B, E, H, K, L, O, R, V | — | — |
| 1UPM | Activated spinach rubisco complexed with 2-carboxyarabinitol 2 bisphosphat and CA2+. | x-ray diffraction | B, E, H, K, L, O, R, V | — | — |
| 1UPP | SPINACH RUBISCO IN COMPLEX WITH 2-CARBOXYARABINITOL 2 BISPHOSPHATE and Calcium. | x-ray diffraction | A, C, E, G | — | — |
| 1UPP | Spinach rubisco in complex with 2-carboxyarabinitol 2 bisphosphate and calcium. | x-ray diffraction | A, C, E, G | — | — |
| 8QJ0 | Room-temperature Serial Synchrotron Crystallography structure of Spinacia oleracea RuBisCO | x-ray diffraction | L, M, N, O | MG | 20 (best 0.73) |
| 8RUC | Activated spinach rubisco complexed with 2-carboxyarabinitol bisphosphate | x-ray diffraction | A, C, E, G | MG, CAP | 20 (best 0.77) |
| 8RUC | Activated spinach rubisco complexed with 2-carboxyarabinitol bisphosphate | x-ray diffraction | A, C, E, G | MG, CAP | — |
| P00875 | AlphaFold monomer V2.0 prediction for ribulose bisphosphate carboxylase large chain (P00875) | predicted | A | — | 4 (best 0.63) |
Ligands
Experiment against prediction
- 1IR1 chain A against the predicted model P00875: TM-score 1.00, RMSD 0.30 Å
- 1IR1 chain A against the predicted model P00875: TM-score 1.00, RMSD 0.30 Å
- 1UPP chain A against the predicted model P00875: TM-score 0.99, RMSD 0.52 Å
- 1UPP chain A against the predicted model P00875: TM-score 0.99, RMSD 0.52 Å
- 1RCX chain L against the predicted model P00875: TM-score 0.99, RMSD 0.51 Å
- 1RCX chain L against the predicted model P00875: TM-score 0.99, RMSD 0.51 Å
- 1RBO chain L against the predicted model P00875: TM-score 0.99, RMSD 0.53 Å
- 1RBO chain L against the predicted model P00875: TM-score 0.99, RMSD 0.53 Å
- 8RUC chain A against the predicted model P00875: TM-score 0.99, RMSD 0.54 Å
- 8RUC chain A against the predicted model P00875: TM-score 0.99, RMSD 0.54 Å
Elsewhere
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