UniProt O48661
Spermidine synthase 2 (O48661)
Spermidine synthase 2 (UniProt O48661), EC 2.5.1.16: 2 experimental structures and 1 predicted model on GenesisL1, 21 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- O48661
- Protein
- Spermidine synthase 2
- EC
- 2.5.1.16
- Experimental structures
- 2
- Predicted models
- 1
- Pockets
- 21 · 2 records with a druggable one
Structures
3 records of O48661 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6O64 | Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 2 (AtSPDS2) | x-ray diffraction | A, B, C, D, E, F, G, H | — | 20 (best 0.81) |
| 6O64 | Crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (ATSPDS2) | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| O48661 | AlphaFold monomer V2.0 prediction for spermidine synthase 2 (O48661) | predicted | A | — | 1 (best 0.80) |
Experiment against prediction
- 6O64 chain D against the predicted model O48661: TM-score 0.99, RMSD 0.51 Å
- 6O64 chain D against the predicted model O48661: TM-score 0.99, RMSD 0.51 Å
- 6O64 chain C against the predicted model O48661: TM-score 0.99, RMSD 0.57 Å
- 6O64 chain C against the predicted model O48661: TM-score 0.99, RMSD 0.57 Å
- 6O64 chain E against the predicted model O48661: TM-score 0.99, RMSD 0.79 Å
- 6O64 chain E against the predicted model O48661: TM-score 0.99, RMSD 0.79 Å
- 6O64 chain G against the predicted model O48661: TM-score 0.99, RMSD 0.70 Å
- 6O64 chain G against the predicted model O48661: TM-score 0.99, RMSD 0.70 Å
- 6O64 chain A against the predicted model O48661: TM-score 0.99, RMSD 0.72 Å
- 6O64 chain A against the predicted model O48661: TM-score 0.99, RMSD 0.72 Å
Elsewhere
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