UniProt O43927

C-X-C motif chemokine 13 (O43927)

C-X-C motif chemokine 13 (UniProt O43927): 7 experimental structures and 1 predicted model on GenesisL1, 8 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.

UniProt: O43927
Protein: C-X-C motif chemokine 13
Experimental structures: 7
Predicted models: 1
Pockets: 8 · 2 records with a druggable one

Structures

8 records of O43927 in the MolNFT archive: 7 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
5CBA	3B4 in complex with CXCL13 - 3B4-CXCL13	x-ray diffraction	E, F	—	4 (best 0.77)
5CBA	3B4 in complex with CXCL13 - 3B4-CXCL13	x-ray diffraction	E, F	—	—
5CBE	E10 in complex with CXCL13	x-ray diffraction	E, F	—	—
6VGJ	N-terminal variant of CXCL13	x-ray diffraction	A, B, C, D, E, F, G	—	4 (best 0.63)
6VGJ	N-terminal variant of CXCL13	x-ray diffraction	A, B, C, D, E, F, G	—	—
7JNY	Crystal structure of CXCL13	x-ray diffraction	A	—	—
7JNY	Crystal structure of CXCL13	x-ray diffraction	A	—	—
O43927	AlphaFold monomer V2.0 prediction for C-X-C motif chemokine 13 (O43927)	predicted	A	—	—

Experiment against prediction

5CBA chain E against the predicted model O43927: TM-score 0.88, RMSD 1.40 Å
5CBA chain E against the predicted model O43927: TM-score 0.88, RMSD 1.40 Å
6VGJ chain D against the predicted model O43927: TM-score 0.85, RMSD 1.24 Å
6VGJ chain D against the predicted model O43927: TM-score 0.85, RMSD 1.24 Å
6VGJ chain G against the predicted model O43927: TM-score 0.85, RMSD 1.24 Å
6VGJ chain G against the predicted model O43927: TM-score 0.85, RMSD 1.24 Å
5CBE chain E against the predicted model O43927: TM-score 0.85, RMSD 1.68 Å
6VGJ chain B against the predicted model O43927: TM-score 0.85, RMSD 1.29 Å
6VGJ chain B against the predicted model O43927: TM-score 0.85, RMSD 1.29 Å
5CBA chain F against the predicted model O43927: TM-score 0.84, RMSD 1.92 Å

Elsewhere

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