UniProt O34928
Peptidoglycan-N-acetylmuramic acid deacetylase pdaa (O34928)
Peptidoglycan-N-acetylmuramic acid deacetylase pdaa (UniProt O34928): 8 experimental structures and 1 predicted model on GenesisL1, 2 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- O34928
- Protein
- Peptidoglycan-N-acetylmuramic acid deacetylase pdaa
- Experimental structures
- 8
- Predicted models
- 1
- Pockets
- 2 · 0 records with a druggable one
Structures
9 records of O34928 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1NY1 | Crystal structure of B. subtilis polysaccharide deacetylase northeast structural genomics… | x-ray diffraction | A, B | — | — |
| 1NY1 | Crystal structure of B. subtilis polysaccharide deacetylase northeast structural genomics… | x-ray diffraction | A, B | — | — |
| 1W17 | Structure of Bacillus subtilis PdaA, a family 4 Carbohydrate esterase. | x-ray diffraction | A, B | — | — |
| 1W17 | Structure of bacillus subtilis pdaa, a family 4 carbohydrate esterase. | x-ray diffraction | A, B | — | — |
| 1W1A | Structure of Bacillus subtilis PdaA in complex with NAG, a family 4 Carbohydrate esterase. | x-ray diffraction | 1, 2 | — | — |
| 1W1A | Structure of bacillus subtilis pdaa in complex with nag, a family 4 carbohydrate esterase. | x-ray diffraction | 1, 2 | — | — |
| 1W1B | Structure of Bacillus subtilis PdaA with Cadmium, a family 4 Carbohydrate esterase. | x-ray diffraction | 1, 2 | — | — |
| 1W1B | Structure of bacillus subtilis pdaa with cadmium, a family 4 carbohydrate esterase. | x-ray diffraction | 1, 2 | — | — |
| O34928 | AlphaFold monomer V2.0 prediction for peptidoglycan-N-acetylmuramic acid deacetylase pdaa (O34928) | predicted | A | — | 2 (best 0.47) |
Experiment against prediction
- 1NY1 chain A against the predicted model O34928: TM-score 1.00, RMSD 0.18 Å
- 1NY1 chain A against the predicted model O34928: TM-score 1.00, RMSD 0.18 Å
- 1W17 chain B against the predicted model O34928: TM-score 1.00, RMSD 0.21 Å
- 1W17 chain B against the predicted model O34928: TM-score 1.00, RMSD 0.21 Å
- 1W1A chain 1 against the predicted model O34928: TM-score 1.00, RMSD 0.23 Å
- 1W1A chain 1 against the predicted model O34928: TM-score 1.00, RMSD 0.23 Å
- 1W1B chain 2 against the predicted model O34928: TM-score 1.00, RMSD 0.24 Å
- 1W1B chain 2 against the predicted model O34928: TM-score 1.00, RMSD 0.24 Å
- 1W1B chain 1 against the predicted model O34928: TM-score 1.00, RMSD 0.30 Å
- 1W1B chain 1 against the predicted model O34928: TM-score 1.00, RMSD 0.30 Å
Elsewhere
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