UniProt O25836
Formamidase (O25836)
Formamidase (UniProt O25836), EC 3.5.1.49: 8 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 27 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- O25836
- Protein
- Formamidase
- EC
- 3.5.1.49
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 27 · 4 records with a druggable one
Structures
9 records of O25836 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2DYU | Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad | x-ray diffraction | A, B | — | 1 (best 0.59) |
| 2DYU | Helicobacter pylori formamidase amif contains a fine-tuned cysteine- glutamate-lysine catalytic… | x-ray diffraction | A, B | — | — |
| 2DYV | Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad | x-ray diffraction | A, B | — | 1 (best 0.65) |
| 2DYV | Helicobacter pylori formamidase amif contains a fine-tuned cysteine- glutamate-lysine catalytic… | x-ray diffraction | A, B | — | — |
| 2E2K | Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad | x-ray diffraction | A, B, C, D, E, F | — | 20 (best 0.86) |
| 2E2K | Helicobacter pylori formamidase amif contains a fine-tuned cysteine- glutamate-lysine catalytic… | x-ray diffraction | A, B, C, D, E, F | — | — |
| 2E2L | Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad | x-ray diffraction | A, B, C, D, E, F | ARF | 5 (best 0.86) |
| 2E2L | Helicobacter pylori formamidase amif contains a fine-tuned cysteine- glutamate-lysine catalytic… | x-ray diffraction | A, B, C, D, E, F | — | — |
| O25836 | AlphaFold monomer V2.0 prediction for formamidase (O25836) | predicted | A | — | — |
Ligands
- ARF · Formamide · in 1 record
Experiment against prediction
- 2E2L chain D against the predicted model O25836: TM-score 0.99, RMSD 0.98 Å
- 2E2L chain D against the predicted model O25836: TM-score 0.99, RMSD 0.98 Å
- 2E2L chain C against the predicted model O25836: TM-score 0.99, RMSD 0.99 Å
- 2E2L chain C against the predicted model O25836: TM-score 0.99, RMSD 0.99 Å
- 2E2L chain F against the predicted model O25836: TM-score 0.99, RMSD 0.99 Å
- 2E2L chain F against the predicted model O25836: TM-score 0.99, RMSD 0.99 Å
- 2E2L chain B against the predicted model O25836: TM-score 0.99, RMSD 1.01 Å
- 2E2L chain B against the predicted model O25836: TM-score 0.99, RMSD 1.01 Å
- 2E2L chain A against the predicted model O25836: TM-score 0.99, RMSD 1.01 Å
- 2E2L chain A against the predicted model O25836: TM-score 0.99, RMSD 1.01 Å
Elsewhere
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