UniProt O05728
Immunoglobulin G-binding protein G, Virulence-associated protein D (O05728)
Immunoglobulin G-binding protein G, Virulence-associated protein D (UniProt O05728): 2 experimental structures and 1 predicted model on GenesisL1, 2 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- O05728
- Protein
- Immunoglobulin G-binding protein G, Virulence-associated protein D
- Experimental structures
- 2
- Predicted models
- 1
- Pockets
- 2 · 0 records with a druggable one
Structures
3 records of O05728 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3UI3 | Structural and Biochemical Characterization of HP0315 from Helicobacter pylori as a VapD Protein… | x-ray diffraction | A, B | — | 1 (best 0.40) |
| 3UI3 | Structural and biochemical characterization of HP0315 from helicobacter pylori as a vapd protein… | x-ray diffraction | A, B | — | 1 (best 0.40) |
| O05728 | AlphaFold monomer V2.0 prediction for endoribonuclease vapd (O05728) | predicted | A | — | — |
Experiment against prediction
- 3UI3 chain A against the predicted model O05728: TM-score 0.64, RMSD 0.79 Å
- 3UI3 chain A against the predicted model O05728: TM-score 0.64, RMSD 0.79 Å
- 3UI3 chain B against the predicted model O05728: TM-score 0.87, RMSD 0.87 Å
- 3UI3 chain B against the predicted model O05728: TM-score 0.87, RMSD 0.87 Å
- 3UI3 chain A against the predicted model P19909: TM-score 0.34, RMSD 2.39 Å
- 3UI3 chain A against the predicted model P19909: TM-score 0.34, RMSD 2.39 Å
- 3UI3 chain B against the predicted model P19909: TM-score 0.31, RMSD 3.41 Å
- 3UI3 chain B against the predicted model P19909: TM-score 0.31, RMSD 3.41 Å
Elsewhere
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