UniProt I2DBY1
Dye-decolorizing peroxidase (I2DBY1)
Dye-decolorizing peroxidase (UniProt I2DBY1), EC 1.11.1.19: 21 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- I2DBY1
- Protein
- Dye-decolorizing peroxidase
- EC
- 1.11.1.19
- Experimental structures
- 21
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 1 · 1 record with a druggable one
Structures
22 records of I2DBY1 in the MolNFT archive: 21 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4UZI | Crystal Structure of AauDyP Complexed with Imidazole | x-ray diffraction | A, B | — | — |
| 4UZI | Crystal structure of aaudyp complexed with imidazole | x-ray diffraction | A, B | — | — |
| 4W7J | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae | x-ray diffraction | A, B, C, D | — | — |
| 4W7J | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae | x-ray diffraction | A, B, C, D | — | — |
| 4W7K | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. Y147S mutant | x-ray diffraction | A, B | — | — |
| 4W7K | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. Y147S mutant | x-ray diffraction | A, B | — | — |
| 4W7L | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. D168N mutant | x-ray diffraction | A, B | — | — |
| 4W7L | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. D168N mutant | x-ray diffraction | A, B | — | — |
| 4W7M | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. W377S mutant | x-ray diffraction | A, B | — | — |
| 4W7M | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. W377S mutant | x-ray diffraction | A, B | — | — |
| 4W7N | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. Y147S and… | x-ray diffraction | A, B | — | — |
| 4W7N | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. Y147S and… | x-ray diffraction | A, B | — | — |
| 4W7O | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. G169L, Y147S… | x-ray diffraction | A | — | — |
| 4W7O | Crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae. G169L, Y147S… | x-ray diffraction | A | — | — |
| 5AG0 | DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5 | x-ray diffraction | A, B | — | — |
| 5AG0 | Dyp-type peroxidase of auricularia auricula-judae (aaudypi) crystallized at pH 6.5 | x-ray diffraction | A, B | — | — |
| 5AG1 | Dyp-type peroxidase of auricularia auricula-judae (aaudypi) with meso- nitrated heme | x-ray diffraction | A, B | — | — |
| 5IKD | Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase | x-ray diffraction | A | HEM | 1 (best 0.84) |
| 5IKD | Asymmetric sulfoxidation by engineering the heme pocket of a dye- decolorizing peroxidase | x-ray diffraction | A | — | — |
| 5IKG | Asymmetric sulfoxidation by engineering the heme pocket of a dye-decolorizing peroxidase | x-ray diffraction | A | HEM | — |
| 5IKG | Asymmetric sulfoxidation by engineering the heme pocket of a dye- decolorizing peroxidase | x-ray diffraction | A | — | — |
| I2DBY1 | AlphaFold monomer V2.0 prediction for dye-decolorizing peroxidase AAUDYP1 (I2DBY1) | predicted | A | — | — |
Ligands
- HEM · Protoporphyrin IX containing Fe · in 2 records
Experiment against prediction
- 4UZI chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.26 Å
- 4UZI chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.26 Å
- 4W7N chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.27 Å
- 4W7N chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.27 Å
- 4W7O chain A against the predicted model I2DBY1: TM-score 1.00, RMSD 0.29 Å
- 4W7O chain A against the predicted model I2DBY1: TM-score 1.00, RMSD 0.29 Å
- 4W7M chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.30 Å
- 4W7M chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.30 Å
- 4W7K chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.30 Å
- 4W7K chain B against the predicted model I2DBY1: TM-score 1.00, RMSD 0.30 Å
Elsewhere
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