UniProt G5EBD7
6-phosphogluconate dehydrogenase (G5EBD7)
6-phosphogluconate dehydrogenase (UniProt G5EBD7), EC 1.1.1.343: 2 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 12 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- G5EBD7
- Protein
- 6-phosphogluconate dehydrogenase
- EC
- 1.1.1.343
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 12 · 1 record with a druggable one
Structures
3 records of G5EBD7 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6XEQ | Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans | x-ray diffraction | A, B, C, D | SO4 | 12 (best 0.79) |
| 6XEQ | Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from gluconobacter oxidans | x-ray diffraction | A, B, C, D | SO4 | — |
| G5EBD7 | AlphaFold monomer V2.0 prediction for 6-phosphogluconate dehydrogenase, NAD(+)-dependent… | predicted | A | — | — |
Ligands
- SO4 · Sulfate ion · in 2 records
Experiment against prediction
- 6XEQ chain A against the predicted model G5EBD7: TM-score 0.96, RMSD 1.18 Å
- 6XEQ chain A against the predicted model G5EBD7: TM-score 0.96, RMSD 1.18 Å
- 6XEQ chain C against the predicted model G5EBD7: TM-score 0.96, RMSD 1.20 Å
- 6XEQ chain C against the predicted model G5EBD7: TM-score 0.96, RMSD 1.20 Å
- 6XEQ chain D against the predicted model G5EBD7: TM-score 0.95, RMSD 1.64 Å
- 6XEQ chain D against the predicted model G5EBD7: TM-score 0.95, RMSD 1.64 Å
- 6XEQ chain B against the predicted model G5EBD7: TM-score 0.95, RMSD 1.70 Å
- 6XEQ chain B against the predicted model G5EBD7: TM-score 0.95, RMSD 1.70 Å
Elsewhere
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