UniProt D0CY60
Dimethlysulfonioproprionate lyase DddQ (D0CY60)
Dimethlysulfonioproprionate lyase DddQ (UniProt D0CY60), EC 4.4.1.3: 10 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 9 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- D0CY60
- Protein
- Dimethlysulfonioproprionate lyase DddQ
- EC
- 4.4.1.3
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 9 · 4 records with a druggable one
Structures
11 records of D0CY60 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4LA2 | Crystal structure of dimethylsulphoniopropionate (DMSP) lyase DddQ | x-ray diffraction | A, B | — | — |
| 4LA2 | Crystal structure of dimethylsulphoniopropionate (dmsp) lyase dddq | x-ray diffraction | A, B | — | — |
| 4LA3 | Crystal structure of dimethylsulphoniopropionate (DMSP) lyase DddQ Y131A in complex with DMSP | x-ray diffraction | A, B | — | — |
| 4LA3 | Crystal structure of dimethylsulphoniopropionate (dmsp) lyase dddq Y131A in complex with dmsp | x-ray diffraction | A, B | — | — |
| 5JSO | Structures of DddQ from Ruegeria lac. Reveal Key Residues for Metal Binding and Catalysis - TRIS… | x-ray diffraction | A, B | FE, CL | 3 (best 0.73) |
| 5JSO | Structures of dddq from ruegeria lac. reveal key residues for metal binding and catalysis - tris… | x-ray diffraction | A, B | — | — |
| 5JSP | New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent… | x-ray diffraction | A, B | FE, DQY, BR, CL | 2 (best 0.73) |
| 5JSP | New mechanistic insight from substrate and product bound structures of the metal-dependent… | x-ray diffraction | A, B | FE, DQY, BR, CL | 2 (best 0.73) |
| 5JSR | New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent… | x-ray diffraction | A, B | FE, AKR, BR, CL | 2 (best 0.71) |
| 5JSR | New mechanistic insight from substrate and product bound structures of the metal-dependent… | x-ray diffraction | A, B | — | — |
| D0CY60 | AlphaFold monomer V2.0 prediction for dimethylsulfonioproprionate lyase dddq (D0CY60) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5JSO chain A against the predicted model D0CY60: TM-score 1.00, RMSD 0.33 Å
- 5JSO chain A against the predicted model D0CY60: TM-score 1.00, RMSD 0.33 Å
- 5JSR chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.33 Å
- 5JSR chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.33 Å
- 5JSP chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
- 5JSP chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
- 5JSR chain A against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
- 5JSR chain A against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
- 5JSO chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
- 5JSO chain B against the predicted model D0CY60: TM-score 1.00, RMSD 0.34 Å
Elsewhere
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