UniProt B7I7B6
50S ribosomal protein L25 (B7I7B6)
50S ribosomal protein L25 (UniProt B7I7B6): 19 experimental structures and 1 predicted model on GenesisL1, 13 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- B7I7B6
- Protein
- 50S ribosomal protein L25
- Experimental structures
- 19
- Predicted models
- 1
- Pockets
- 13 · 11 records with a druggable one
Structures
20 records of B7I7B6 in the MolNFT archive: 19 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6V39 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | electron microscopy | U | — | — |
| 6V3A | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | electron microscopy | U | — | — |
| 6V3B | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | electron microscopy | U | — | 1 (best 0.86) |
| 6V3D | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | electron microscopy | U | — | — |
| 7M4V | A. baumannii Ribosome-Eravacycline complex: 50S | electron microscopy | U | — | 1 (best 0.86) |
| 7M4V | A. baumannii ribosome-eravacycline complex: 50S | electron microscopy | U | — | — |
| 7M4W | A. baumannii Ribosome-Eravacycline complex: Empty 70S | electron microscopy | U | — | 1 (best 0.87) |
| 7M4X | A. baumannii Ribosome-Eravacycline complex: P-site tRNA 70S | electron microscopy | U | — | 2 (best 0.87) |
| 7M4Y | A. baumannii Ribosome-Eravacycline complex: E-site tRNA 70S | electron microscopy | U | — | 1 (best 0.85) |
| 7M4Z | A. baumannii Ribosome-Eravacycline complex: hpf-bound 70S | electron microscopy | U | — | 1 (best 0.86) |
| 7RYF | A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S | electron microscopy | U | — | — |
| 7RYG | A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S | electron microscopy | U | — | 1 (best 0.86) |
| 7RYH | A. baumannii Ribosome-TP-6076 complex: Empty 70S | electron microscopy | U | — | 1 (best 0.86) |
| 7UVV | A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA | electron microscopy | U | — | 2 (best 0.87) |
| 7UVW | A. baumannii ribosome: 70S with E-site tRNA | electron microscopy | U | — | — |
| 7UVX | A. baumannii 70S ribosome-Streptothricin-F complex | electron microscopy | U | — | — |
| 7UVY | A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA | electron microscopy | U | — | 1 (best 0.86) |
| 7UVZ | A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA | electron microscopy | U | — | 1 (best 0.86) |
| 7UW1 | A. baumannii 70S ribosome-Streptothricin-D complex | electron microscopy | U | — | — |
| B7I7B6 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L25 (B7I7B6) | predicted | A | — | — |
Experiment against prediction
- 7UW1 chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.98 Å
- 7UVY chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 1.01 Å
- 7UVZ chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.96 Å
- 6V39 chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.79 Å
- 7UVV chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.97 Å
- 7RYH chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.93 Å
- 7M4Y chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.98 Å
- 7M4V chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.99 Å
- 7M4V chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 0.99 Å
- 7M4X chain U against the predicted model B7I7B6: TM-score 0.96, RMSD 1.00 Å
Elsewhere
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