UniProt B5DE31
Zebra fish Y-box protein1 (YB-1) (B5DE31)
Zebra fish Y-box protein1 (YB-1) (UniProt B5DE31): 2 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- B5DE31
- Protein
- Zebra fish Y-box protein1 (YB-1)
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 1
Structures
3 records of B5DE31 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6A6J | Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA | x-ray diffraction | A, C | ZN | — |
| 6A6J | Crystal structure of zebra fish Y-box PROTEIN1 (yb-1) cold-shock domain in complex with 6MER M5C RNA | x-ray diffraction | A, C | ZN | — |
| B5DE31 | AlphaFold monomer V2.0 prediction for Y-box-binding protein 1 (B5DE31) | predicted | A | — | — |
Ligands
- ZN · Zinc ion · in 2 records
Experiment against prediction
- 6A6J chain C against the predicted model B5DE31: TM-score 0.97, RMSD 0.68 Å
- 6A6J chain A against the predicted model B5DE31: TM-score 0.96, RMSD 0.71 Å
- 6A6J chain A against the predicted model B5DE31: TM-score 0.96, RMSD 0.71 Å
Elsewhere
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