UniProt A1AGK1
50S ribosomal protein L16 (A1AGK1)
50S ribosomal protein L16 (UniProt A1AGK1): 5 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 7 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- A1AGK1
- Protein
- 50S ribosomal protein L16
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 7 · 5 records with a druggable one
Structures
6 records of A1AGK1 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 8G6Y | Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and… | electron microscopy | l | — | 1 (best 0.85) |
| 9AX7 | 70S initiation complex (tRNA-fMet M1 + CUG start codon) | electron microscopy | l | MG | 2 (best 0.89) |
| 9CG5 | 70S initiation complex (tRNA-fMet M1 + UUG start codon) | electron microscopy | l | MG | 2 (best 0.87) |
| 9CG6 | 70S initiation complex (tRNA-fMet M1 + GUG start codon) | electron microscopy | l | MG | 1 (best 0.87) |
| 9CG7 | 70S initiation complex (tRNA-fMet M1 + AUG start codon) | electron microscopy | l | MG | 1 (best 0.88) |
| A1AGK1 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L16 (A1AGK1) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 4 records
Experiment against prediction
- 8G6Y chain l against the predicted model A1AGK1: TM-score 1.00, RMSD 0.31 Å
- 9CG7 chain l against the predicted model A1AGK1: TM-score 0.99, RMSD 0.34 Å
- 9CG5 chain l against the predicted model A1AGK1: TM-score 0.99, RMSD 0.34 Å
- 9CG6 chain l against the predicted model A1AGK1: TM-score 0.99, RMSD 0.36 Å
- 9AX7 chain l against the predicted model A1AGK1: TM-score 0.99, RMSD 0.37 Å
Elsewhere
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