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Ligand · ZYN

ZYN · 6-(3-chloro-4-fluorobenzyl)-4-hydroxy-N,N-dimethyl-2-(1-methylethyl)-3,5-dioxo-2,3,5,6,7,8-hexahydro-2,6-naphthyridine-1-carboxamide

ZYN, 6-(3-chloro-4-fluorobenzyl)-4-hydroxy-N,N-dimethyl-2-(1-methylethyl)-3,5-dioxo-2,3,5,6,7,8-hexahydro-2,6-naphthyridine-1-carboxamide (C21 H23 Cl F N3 O4, 435.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB…

Component
ZYN
Formula
C21 H23 Cl F N3 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

ZYN in 2 structures; the first of them:

  • 3OYH · Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium… · ZYN A398 · binds ASP128, TYR129, ASP185, GLN186, GLY187, TYR212, PRO214, GLN215 and 4 more
  • 3OYH · Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium… · ZYN A398 · binds ASP128, TYR129, ASP185, GLN186, GLY187, TYR212, PRO214, GLN215 and 4 more

Residues it binds most

ASP 2, GLN 2, TYR 2, DA 2, DC 2, DG 2, GLU 2, GLY 2, PRO 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • NH4 · Ammonium ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

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