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Ligand · ZYM

ZYM · 2,4-dioxo-4-{[3-(3-phenoxyphenyl)propyl]amino}butanoic acid

ZYM, 2,4-dioxo-4-{[3-(3-phenoxyphenyl)propyl]amino}butanoic acid (C19 H19 N O5, 341.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
ZYM
Formula
C19 H19 N O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

ZYM in 2 structures; the first of them:

  • 4F6V · Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with… · ZYM A301 · binds MET15, PHE22, PHE26, VAL37, TYR41, CYS44, ARG45, ASP48 and 9 more
  • 4F6V · Crystal structure of dehydrosqualene synthase (crtm) from S. aureus complexed with… · ZYM A301 · binds MET15, PHE22, PHE26, VAL37, TYR41, CYS44, ARG45, ASP48 and 9 more

Residues it binds most

ARG 2, VAL 2, ASP 2, LEU 2, PHE 2, ASN 2, CYS 2, GLN 2, MET 2, TYR 2 (residue and the binding sites it lines).

Found with

  • FJP · (2E,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl dihydrogen phosphate
  • SRT · S,R meso-tartaric acid
  • MG · Magnesium ion

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