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Ligand · ZKD

ZKD · Uridine-diphosphate-1-deoxy-1-thio-N-acetylglucosamine

ZKD, Uridine-diphosphate-1-deoxy-1-thio-N-acetylglucosamine (C17 H27 N3 O16 P2 S, 623.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
ZKD
Formula
C17 H27 N3 O16 P2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

ZKD in 2 structures; the first of them:

  • 2XGO · XcOGT in complex with UDP-S-GlcNAc · ZKD A1569 · binds ARG137, PHE165, ALA217, HIS218, PRO219, LEU222, ASN385, TYR387 and 13 more
  • 2XGO · Xcogt in complex with udp-S-glcnac · ZKD A1569 · binds ARG137, PHE165, ALA217, HIS218, PRO219, LEU222, ASN385, TYR387 and 13 more

Residues it binds most

HIS 2, LEU 2, PRO 2, LYS 2, THR 2, TYR 2, ALA 2, ARG 2, ASN 2, ASP 2 (residue and the binding sites it lines).

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