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Ligand · ZD0

ZD0 · methyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-alpha-D-mannopyranoside

ZD0, methyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-alpha-D-mannopyranoside (C11 H21 N O7, 279.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
ZD0
Formula
C11 H21 N O7
Class
sugar
Structures
2
PDB entries
1

Binding sites

ZD0 in 2 structures; the first of them:

  • 1F4Y · Crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae O1 in… · ZD0 A1 · binds TYR34, TRP93, SER95, GLY96
  • 1F4Y · Crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae O1 in… · ZD0 A1 · binds TYR34, TRP93, SER95, GLY96

Residues it binds most

GLY 2, SER 2, TRP 2, TYR 2 (residue and the binding sites it lines).

Found with

  • ZCZ · 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranose

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