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Ligand · YVU

YVU · 5'-S-[2-(benzylcarbamamido)ethyl]-5'-thioadenosine

YVU, 5'-S-[2-(benzylcarbamamido)ethyl]-5'-thioadenosine (C20 H25 N7 O4 S, 459.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
YVU
Formula
C20 H25 N7 O4 S
Class
ligand
Structures
2
PDB entries
2

Binding sites

YVU in 2 structures; the first of them:

  • 8G2G · Crystal structure of PRMT3 with compound YD1113 · YVU A601 · binds TYR220, PHE221, TYR224, HIS230, MET233, LEU234, ARG239, THR240 and 19 more
  • 8G2H · Crystal Structure of PRMT4 with Compound YD1113 · YVU A501 · binds TYR149, PHE150, TYR153, GLN159, MET162, MET163, ARG168, THR169 and 19 more

Residues it binds most

GLY 3, TYR 3, GLU 3, ILE 3, MET 3, SER 3, LEU 3, PHE 2, VAL 3, ARG 3 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • SO4 · Sulfate ion
  • UNX · Unknown atom or ion
  • GOL · Glycerol

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