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Ligand · YUD

YUD · (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate

YUD, (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate (C31 H42 N2 O8 S, 602.7 g/mol), in the MolNFT structures on…

Component
YUD
Formula
C31 H42 N2 O8 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

YUD in 4 structures; the first of them:

  • 7M9T · HIV-1 Protease WT (NL4-3) in Complex with NR02-73 · YUD A101 · binds ARG8, LEU23, ASP25, GLY27, ALA28, ASP29, ASP30, VAL32 and 21 more
  • 7M9W · HIV-1 Protease (I84V) in Complex with NR02-73 · YUD A101 · binds ARG8, LEU23, ASP25, GLY27, ALA28, ASP29, ASP30, VAL32 and 21 more
  • 7M9T · HIV-1 protease wt (NL4-3) in complex with NR02-73 · YUD A101 · binds ARG8, LEU23, ASP25, GLY27, ALA28, ASP29, ASP30, VAL32 and 17 more
  • 7M9W · HIV-1 protease (I84V) in complex with NR02-73 · YUD A101 · binds ARG8, ASP25, GLY27, ALA28, ASP29, ASP30, VAL32, ILE47 and 17 more

Residues it binds most

ASP 4, GLY 4, VAL 4, ILE 4, ALA 4, PRO 4, LEU 3, ARG 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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