GL1X · GenesisL1 explorer

Ligand · YTW

YTW · (3~{A}~{R},4~{S},5~{S},6~{S},7~{R},7~{A}~{S})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{A},4,5,6,7, 7~{A}-hexahydro-3~{H}-benzo[d][1,2,3]oxathiazole-4,5, 6-triol

YTW, (3~{A}~{R},4~{S},5~{S},6~{S},7~{R},7~{A}~{S})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{A},4,5,6,7, 7~{A}-hexahydro-3~{H}-benzo[d][1,2,3]oxathiazole-4,5, 6-triol (C7 H13 N O7 S, 255.2 g/mol), in the MolNFT structures on GenesisL1…

Component
YTW
Formula
C7 H13 N O7 S
Class
ligand
Structures
3
PDB entries
2

Binding sites

YTW in 3 structures; the first of them:

  • 6IBK · Crystal structure of human alpha-galactosidase A in complex with alpha-galactose… · YTW A525 · binds TRP47, ASP92, ASP93, TYR134, CYS142, ALA143, LYS168, ASP170 and 6 more
  • 7P2Z · Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with… · YTW AaA1002 · binds TRP376, ASP404, LEU405, ILE441, TRP481, TRP516, ASP518, MET519 and 5 more
  • 6IBK · Crystal structure of human alpha-galactosidase a in complex with alpha-galactose… · YTW A525 · binds TRP47, ASP92, ASP93, TYR134, CYS142, ALA143, LYS168, ASP170 and 4 more

Residues it binds most

ASP 5, TRP 5, TYR 4, ARG 5, CYS 4, GLU 4, LYS 4, ALA 3, LEU 3, HIS 1 (residue and the binding sites it lines).

Found with

  • BMA · beta-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • MAN · alpha-D-mannopyranose
  • ACT · Acetate ion
  • PEG · Di(hydroxyethyl)ether
  • FUC · alpha-L-fucopyranose
  • CL · Chloride ion
  • GOL · Glycerol
  • PGE · Triethylene glycol

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