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Ligand · YT1

YT1 · PB28

YT1, PB28 (C24 H38 N2 O, 370.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
YT1
Formula
C24 H38 N2 O
Class
ligand
Structures
2
PDB entries
1

Binding sites

YT1 in 2 structures; the first of them:

  • 7M93 · Bovine sigma-2 receptor bound to PB28 · YT1 A201 · binds ILE24, ASP29, LEU46, TRP49, TYR50, PHE54, LEU59, PHE66 and 8 more
  • 7M93 · Bovine sigma-2 receptor bound to PB28 · YT1 A201 · binds ILE24, ASP29, LEU46, TRP49, TYR50, PHE54, LEU59, PHE66 and 8 more

Residues it binds most

LEU 8, TYR 8, ILE 8, PHE 8, ASP 8, GLU 8, VAL 8, MET 6, TRP 4, HIS 2 (residue and the binding sites it lines).

Found with

  • OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

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